Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00048 ATGGCTTCTATTTCTATACAATGGCCATATGAGCAACTTAAAACAGCTTTCTTTTCTTCCACTTCTCACCAATATCTTTTCTGCTTTCTTCTTGTTATTGTTGTGTTGAAGCTAACAAAAAGAGCCAAAATCAAACCCAGTTTCAATCTGCCTCCATCCCCAAGAAAGCTACCAATCATTGGTAATCTTCATCAGCTAGGCACATTGCCATACCATTCTTTTAGAGCCCTCTCACAAAAGCATGGTTCTCTGATGTTGTTGCAGTTGGGGCAGACTCAAGCTTTGGTGGTTTCATCTCTAGATGTGGTCAGGGAAATCATGAAAACCCATGACATAACTTTCTCAAACCGACCCAAATTCACAGCAGCAAAAACCTTACTGTATGGATGTAATGACATTGGTTTTGCATCCTATGGAGAAAGCTGGAGACACAAAAGAAAAATATGTGTCCTTGAGCTTCTGAACCCCAAAAGGGTGCAGTCACTTCGTGTCATCAGAGAAGAAGAGGTTGCAGAATTGGTCAACAAGATACGTGAAGCAGGCTTGAGTGATGCATCCTCTGTGAATCTAAGTGAGTTGCTTATTGAAGCAACAAACAACATCATCTGTAAATGTGCTCTTGGACAGAAGTACAGTACAGAAGAAGATTGTCACAGCAGGATCAAAGAGCTTGCAAGGAGGGCGATGATTCAACTTGGAATTGTCACTGTGGGGGATCGCTTTCCTTTCTTGGGTTGGGTTGATTTTCTAACTGGCCAAATTCAAGAATTCAAGGCCACTTTCGGAGCATTGGATGCTTTATTTGATCAGGTAATTGCAGAGCATAAGAAGATGCAGAGAGAATCTGACCACTGCTCCACTGAGAAAGACTTTGTGGATATCCTCATCCAACTTCAGAAGGATGACATGAATGACTTTGAGCTCACCAACGATGACATCAAATCACTTCTATTGGACATGTTTGTAGCAGGAAGTGATACAACCGCAGCAACACTGGAATGGGCTATTGCAGAGCTCATGAAAAATCCAATGAAATTGAAGAAAGCCCAGGAAGAGGTGAGAAAATTTGCAGGGCATAAATCAAAAGTAGAAGAAAATGACATCAACCAAATGGATTACATGAAATGTGTAGTCAAAGAAACTCTAAGGTTACATCCTCCTGCTCCTCTCTTGGTTCCTAGAGAGACAGCATCTCATGTGAAACTCAGAGGGTATGATATTCCAGCAAAAACACTGGTATATGTCAATGCATGGGCAATTCAGAGGGACCCTGAACTTTGGGAAAGGCCTGAAGAGTTCATTCCAGAGAGGCATGATAACAGCCAGGTTAATTTTAAAGGCCAAGACTTGCAATTTATTCCATTTGGTTTTGGGAGAAGGGCATGCCCCGGAATGACGTTTGGACTTGCTTCTGTTGAGTATATGCTGGCCAACCTTCTTTATTTGTTCAATTGGAAGCTGCCTGCAACTCACACATCTGGACAAGACATAGACATGAGTGAAACATATGGCCTCATTACCTCCAAGAAAGTGCCACTTTATCTTAAACCAATTCCATTTTCATTTGAACCAAATTTAAATTAA 1584 0.4135 MASISIQWPYEQLKTAFFSSTSHQYLFCFLLVIVVLKLTKRAKIKPSFNLPPSPRKLPIIGNLHQLGTLPYHSFRALSQKHGSLMLLQLGQTQALVVSSLDVVREIMKTHDITFSNRPKFTAAKTLLYGCNDIGFASYGESWRHKRKICVLELLNPKRVQSLRVIREEEVAELVNKIREAGLSDASSVNLSELLIEATNNIICKCALGQKYSTEEDCHSRIKELARRAMIQLGIVTVGDRFPFLGWVDFLTGQIQEFKATFGALDALFDQVIAEHKKMQRESDHCSTEKDFVDILIQLQKDDMNDFELTNDDIKSLLLDMFVAGSDTTAATLEWAIAELMKNPMKLKKAQEEVRKFAGHKSKVEENDINQMDYMKCVVKETLRLHPPAPLLVPRETASHVKLRGYDIPAKTLVYVNAWAIQRDPELWERPEEFIPERHDNSQVNFKGQDLQFIPFGFGRRACPGMTFGLASVEYMLANLLYLFNWKLPATHTSGQDIDMSETYGLITSKKVPLYLKPIPFSFEPNLN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00048 527 Gene3D Cytochrome P450 35 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 Pfam Cytochrome P450 51 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 FunFam Cytochrome P450 83B1 37 516 - -
Pumo11g00048 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Pumo11g00048 527 SUPERFAMILY Cytochrome P450 51 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PANTHER CYTOCHROME P450 71B11-RELATED 33 518 - -
Pumo11g00048 527 CDD CYP71-like 80 513 - -
Pumo11g00048 527 Coils Coil 346 366 - -
Pumo11g00048 527 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00048 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00048 Pumo-Chr11 1848096 1850553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00048 26 518 Cytochrome P450 AT1G13110 43.366 1.70e-138 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00048 K20617 - gmx:100785621 900.968