LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo11g00043	ATGGAATCTCGATTAGTTGATGGTAATGATGAGATGGAAGTTTCTGGGGATGTGGGTTTGAGTACATATGAAGTTCAGATACATCAAGAAGCATATGAAGTGGATCCAAATGAGGGGTGTAGAGTACCAGAGAGTTCTTCTGGGGGAGAGTTGGGTATCTGTGATGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCCCGGCGTTTAGGATTTGTCATGCGTGTGATGTCTTGTCGACGCTCAGAAAGGGATGGTAGAATTCTTGCCCGCAGGCTAGGATGTAATAAAGAGGGTTATTGTGTCAGCATCCGTGGGAAATTTGCATCAGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGCTGTAAGGCAATGATTCATATCAAATATGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGAGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCATAAAAAACGGTTGTGTGCAACATATCAAGAACAGTTGACTTCTTTTGTGAAAATTGTTGAAGAGCACAGTGAGAAGCTATCTGTGAAAATTCATCACGTAGTTAATAATCTTAAAGAATTTGAATCCATAGAAGAGCTTTTGCACAAGACATAG	726	0.4036	MESRLVDGNDEMEVSGDVGLSTYEVQIHQEAYEVDPNEGCRVPESSSGGELGICDDHAIQEPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFASVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFVKIVEEHSEKLSVKIHHVVNNLKEFESIEELLHKT	241

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo11g00043	241	Coils	Coil	175	202	-	-
	Pumo11g00043	241	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	34	233	-	-
	Pumo11g00043	241	Pfam	FAR1 DNA-binding domain	77	165	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo11g00043	Pumo-Chr11	1778685	1783351	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Pumo11g00043		FAR1	1.4e-28	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo11g00043	-		-	gmx:100793266	465.692