Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00039 ATGGCAGCCTCAGCCTCATCCATGATATCAACCCCTGCCTTATCATCCCCCACCATCCAAAAGCACCATCATCTGAAGCCATCCAACGTGTGCTTTCAAGGTCTGAGACCCCTCACAAGGTTCACCAAAGCCTCATCAACCAAAGTGAGCACCACCACCAAAAGGGTTGTTCCAAAGGGAGGTGTGAGAGCTGAGCTCAACTCAGCCCTTGTGATAAGCCTCAGCACTGGCCTCTCCCTCTTCTTGGGGAGGTTTGTGTTCTTCAACTTCCAAAGGGAGAACGTGGCAAAACAAGTGCCTGAGCAGAACGGACTCACACACTTTGAGGCTGGTGACACACGTGCCAAGGAGTATGTCAGCCTCCTCAAGTCCAATGACCCTGTTGGATTCAACATTGTTGATGTCTTGGCTTGGGGCTCCATTGGCCATGTTGTTGCTTACTATATCTTGGCCACCACTAGCAATGGCTATGACCCCGCATTCTTTGGCTGA 492 0.5122 MAASASSMISTPALSSPTIQKHHHLKPSNVCFQGLRPLTRFTKASSTKVSTTTKRVVPKGGVRAELNSALVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHVVAYYILATTSNGYDPAFFG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00039 163 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 17 162 IPR016370 -
Pumo11g00039 163 NCBIfam photosystem I reaction center subunit V 71 158 IPR017494 GO:0009522|GO:0009535|GO:0015979
Pumo11g00039 163 ProSitePatterns Photosystem I psaG and psaK proteins signature. 129 146 IPR000549 GO:0009522|GO:0015979|GO:0016020
Pumo11g00039 163 PIRSF PsaK 1 163 IPR016370 -
Pumo11g00039 163 Gene3D - 68 162 IPR023618 GO:0009522|GO:0015979
Pumo11g00039 163 Pfam Photosystem I psaG / psaK 67 157 IPR000549 GO:0009522|GO:0015979|GO:0016020
Pumo11g00039 163 FunFam Photosystem I reaction center subunit V 68 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00039 K08905 - gmx:100305786 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00039 11 1663008 1664056 Pumo11g00039 11 1663008 1664056 ECH