Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00021 ATGGCTGGGATTGATGATAATGTTGCCCTTACTGGTGATTGGGGTCTTCCTAGCCCAAGTACAAGGACCTTTTTCTCTAGAATGTTAGATGAAGATAGTGTGACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGAACTGGGGATCTCTTTTCGGGAACTCGCGAGCCTAGTGAGACAGGGAAAGGAAACATGAAAGATAGGGCACAAGATGGTGATTCTGGAGCCCAATTGACCGATGTGAGCTTTCAGGCCGAGCAGAAGACGAGCTCTCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCCGGGTTTAATGCTCCGAGGTTGAATACAGAAAGCATTAGATCTACTGACCTTTCGCTTAATTCTGACATTCAGTCTCCTTACTTGACCATCCCACCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTTTTTCTTGCCAATTCACTGGCACAGCCATCTCCCACAACTGGAAAGTTCCTGTTCATGTCAAATGGCAACATGCGGAACTCAGAATTATCATCTGATGCTCCAGGAAAATGTAAAGATAATGGCTTTGGTGACATCTATACATCATCCTTTGCTTTCAAGCCTACAACTGATTCAGGCTCCTCTTTTTATTATGGTGCTGGAAGAAAATTAAATCCATCTACACTTCCTCAACAATCCTTTCCTGGTATTGAGGTTTCGGCTCAGACAGAAAATTGTTTTCAATCTCAAAGTGTTGATGCTGTCAAGGTTCAAACTGAGAACAAAAGTGGCCTTCAACTTCAGGCAGACTTTGTCGAATCACCTCCTCAAAAAGATAATGGAATTAAAATGTTCTCAGCTGATCAAAGGGCTTTTGATGCTGTTGGTGGTGGCGTTGAACATTCGACACCAGTTGAAGAGCAAGCAGATGAAGAAGGAGATCAAAGAGGCAATGGAGACTCGATGGCTGGTGGTGTTGGTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGCAGCGAGTACCCTCGAAGTTACTACAAGTGTACACATCCAAACTGTCAGGTTAAGAAGAAAGTAGAAAGATCTCATGAGGGCCACATAACTGAGATCATCTACAAGGGAACGCACAACCATCCAAAACCTCCTCCAAATCGCCGGTCAGGTATGGGTTCGGTTAACCTTCATACTGACATGCAAGTGGATAACCCTGAACACATTGAACCACACAATGGTGGTGATGGCGACCAGGGCTGGGCTAATGTACAAAAGGGAAATATAGCTGGAGCTGCTAATTGGAAGCATGACAACCTTGAAGCAACTTCATCAGCATCTGTTGGCCCTGAATACTGCAACCAGGCCACCAATTTGCAGACTCAAAATGGTACTCACTTTGATTCAGGAGAGGCAGTGGATGCCTCATCTACTTTTTCTAACGAAGAAGATGAAGATGATCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGAGTTGAGTGGAGCTACAAGAGCCATTCGCGAGCCTAGAGTTGTTGTACAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGACAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACGAATGCAGGGTGCACGGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCCGTGATCACTACATACGAGGGAAAGCACAACCATGATGTTCCTGCTGCTCGTGCCAGCAGTCACGTCAATGCTAATGCTTCCAACGCTGTTCCTGGCCAAGCTTCTGGTGTTCTTCAGACCCATGTTCATAGACCTGAACCATCTCAAGTACACAATGGCATTGGAAGGCTTGAGAGGCCTTCCCTTGGTTCATTCAACCTACCCGGGAGACAGCAGCTAGGACCTTCCCATGGCTTCTCTTTCGGTATGAACCAATCCATGCTATCAAATCTGGCGATGTCAGGGTTAGGCCACGCGCAAGCGAAGCTTCCTGTCATGCCTGTTCATCCGTTCTTGGCAGCGCAACAACAACATCAACAACAACAACGCCCTGCAAATGATTTGGGTTTCATGTTGCCAAAGGGAGAGCCAAATGTGGAGGGTATTCCTGAACGCGGTGGCCTTAACCTGTCAAATGGCTTATCAGTGTACCAAGAAATTATGAGTCGCATGCCTCTTGGTCCTCATATGTAA 2271 0.4571 MAGIDDNVALTGDWGLPSPSTRTFFSRMLDEDSVTRSISEHSGSGRTGDLFSGTREPSETGKGNMKDRAQDGDSGAQLTDVSFQAEQKTSSRGGLVERMAARAGFNAPRLNTESIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRNSELSSDAPGKCKDNGFGDIYTSSFAFKPTTDSGSSFYYGAGRKLNPSTLPQQSFPGIEVSAQTENCFQSQSVDAVKVQTENKSGLQLQADFVESPPQKDNGIKMFSADQRAFDAVGGGVEHSTPVEEQADEEGDQRGNGDSMAGGVGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPNRRSGMGSVNLHTDMQVDNPEHIEPHNGGDGDQGWANVQKGNIAGAANWKHDNLEATSSASVGPEYCNQATNLQTQNGTHFDSGEAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNAVPGQASGVLQTHVHRPEPSQVHNGIGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQSMLSNLAMSGLGHAQAKLPVMPVHPFLAAQQQHQQQQRPANDLGFMLPKGEPNVEGIPERGGLNLSNGLSVYQEIMSRMPLGPHM 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00021 756 SUPERFAMILY WRKY DNA-binding domain 323 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 Pfam WRKY DNA -binding domain 541 597 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 Pfam WRKY DNA -binding domain 325 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 614 IPR044810 GO:0003700
Pumo11g00021 756 MobiDBLite consensus disorder prediction 460 476 - -
Pumo11g00021 756 Gene3D WRKY domain 319 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 ProSiteProfiles WRKY domain profile. 325 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 SMART WRKY_cls 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 SMART WRKY_cls 540 599 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 MobiDBLite consensus disorder prediction 460 511 - -
Pumo11g00021 756 SUPERFAMILY WRKY DNA-binding domain 532 600 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 MobiDBLite consensus disorder prediction 75 91 - -
Pumo11g00021 756 Gene3D WRKY domain 527 593 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 FunFam WRKY transcription factor 33 527 593 - -
Pumo11g00021 756 ProSiteProfiles WRKY domain profile. 535 600 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo11g00021 756 MobiDBLite consensus disorder prediction 14 59 - -
Pumo11g00021 756 FunFam WRKY transcription factor 315 384 - -
Pumo11g00021 756 MobiDBLite consensus disorder prediction 290 330 - -
Pumo11g00021 756 MobiDBLite consensus disorder prediction 375 397 - -
Pumo11g00021 756 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00021 Pumo-Chr11 1370902 1376215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00021 1 751 WRKY Transcription Factor Family AT5G56270 48.852 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo11g00021 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00021 K18835 - gmx:100796545 1394.79