Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00020 ATGGCTGAGATGGAAACTATTGGGAAGATTAAGCATAGGAACCTGGTTCAGCTGCTGGGTTACTGTAAAGTTGGAGAGGAGAGGCTGCTTGTGTATGAGTACATGAAATTGGGAAGTCTTGAGGCTGTTTTACATGAGAGGGCAAAAGGAGGAGGTTCAAAGCTTGATTGGGCTGCAAGAAAGAAGATTGCCATAGGGTCAGCAAGAGGTCTTGCATTTCTTCACCATAGTTGCATTCCTCACATTATACACAGGGACATGAAGTCCAGCAATATTCTTCTTGATGAAAACTTTGAGGCCAGAGTTTCTGATTTTGGCATGGCTAGATTGGTTAATGCCCTTGACACTCATCTCACTGTCAGCACACTTGCGGGAACACCAGGTTATGTACCTCCTGAGTACTACCAGAGTTTTAGATGTACAGCAAAAGGGGATGTCTATAGCTATGGTGTCATACTGCTAGAGCTTCTATCGGGGAAGAGACCAATTGACTCTTCTGAGTTTGGTGATGACAGCAATCTTGTTGGATGGTCTAAGAAGCTTTACAAAGAGAAAAGAATTAATGAAATACTTGATCCTGATTTAATTGTGCAAACATCTAGTGATGGTGAACTATTACAATATTTGAGAATTGCTTTTGAATGTCTGGATGAGAGACCATACCGGCGGCCGACCATGATACAAGTGATGGCCATGTTTAAAGAGCTTCAGGTTGACACAGATAATGATATGCTTGATAGCTTCTCTCTGAGAGACAATGTTATTGATGAAGCATGA 777 0.4196 MAEMETIGKIKHRNLVQLLGYCKVGEERLLVYEYMKLGSLEAVLHERAKGGGSKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSSEFGDDSNLVGWSKKLYKEKRINEILDPDLIVQTSSDGELLQYLRIAFECLDERPYRRPTMIQVMAMFKELQVDTDNDMLDSFSLRDNVIDEA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00020 258 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00020 258 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 237 - -
Pumo11g00020 258 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Pumo11g00020 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Pumo11g00020 258 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Pumo11g00020 258 Gene3D Transferase(Phosphotransferase) domain 1 36 254 - -
Pumo11g00020 258 PIRSF ILK 1 246 - -
Pumo11g00020 258 FunFam Brassinosteroid LRR receptor kinase 35 238 - -
Pumo11g00020 258 SMART serkin_6 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00020 258 Pfam Protein kinase domain 2 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00020 Pumo-Chr11 1336337 1337113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00020 1 257 Receptor kinase-like Gene Family AT1G55610 78.764 1.73e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pumo11g00020 Pkinase 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00020 - - gsj:114409366 504.597