Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo118g00008 ATGTCCGAACCCGAAGCCGCTTCGGTGATGTGGCAGCTCATGCAAGCCGTGGCGCACTGCCACCGCCTCGGCGTGGCCCACCGAGACATAAAACCTGACAACATTCTTTTCGACGACCAGAATCGGCTCAAATTAGCCGATTTCGGCTCGGCTGAGACTTTTAACGAGGGCGAGCCGATGAGCGGGGTGGTGGGGACGCCGCATTACGTGGCGCCGGAGGTCCTCGCCGGAAGGGATTACAACGAGAAGGTCGACGTGTGGAGCGCCGGTGTCGTTTTGTATCAAATGTTGGCTGGGTTTCTGCCGTTTCGGGGCGATTCGCCGGTGGAGATTTTTGAGGCCGTGCTTCGAGCCAATTTGAGATTTCCGACTCGTGTTTTTTGTTCCGTCTCACCCGCGGCCAAGGATCTGCTTCGTAGAATGCTGTGTAGAGACGTTTCTAGAAGGTTCTCTGCAGAACAAGTCCTAAGTGCCCGTCTACACCGTGTGACGCCGTCGGAAGCGATTTCCGGCAACGGCGTTATTATTATTATTTTTTTCGCTTCTCCCTTTCTGCCATCTCTGGTTGCATCATCAACATCAACCTCAGCTCTTCAACGCCGTCAACCAGAAGAAAATGGTGGTCGTCAAGACCAAGAAGCTGAAAGTTTGCGAGAACCTCGACGACATCGACGGAGAAGTCGTCCTCCCAATCTACTTTTCTTCTTCCTCGTATTCAGTTTTCAATTTTCAAATGTCCATTATCTTCCATCTACCACAGTGTACATTTCAGCTTATGCAATCAACACCAAGGGTTGGGTCATCGTCCAGAATGAAGACGATGGGGTTTGGGACCGATTCTGTTCGGCGTTTCTTGGGACGGAGCGCAAAATCAGTCACCGAAATTTCGTCGGAGAAGTTCGAGTCTGCCGGAGGAAGGGCACGAAGATCGGAGAGCACGATGGCTGTCGTGGTGCCGTGAAAGTGGTTGCGGTGGTTGCAAATTACAAAGGAGGAGAGGGGAATGGGGAGGCCTGGACGGGGTTGGGTAAAAATAATCATGTGCAGAAAGTGTATGTGGCAATGGCTCACGACAATGGAGGTTTGCGAGTGACAGTGATGATGACTTGCAGGGTGTGGTGGTTTCGGAGGTGA 1134 0.5238 MSEPEAASVMWQLMQAVAHCHRLGVAHRDIKPDNILFDDQNRLKLADFGSAETFNEGEPMSGVVGTPHYVAPEVLAGRDYNEKVDVWSAGVVLYQMLAGFLPFRGDSPVEIFEAVLRANLRFPTRVFCSVSPAAKDLLRRMLCRDVSRRFSAEQVLSARLHRVTPSEAISGNGVIIIIFFASPFLPSLVASSTSTSALQRRQPEENGGRQDQEAESLREPRRHRRRSRPPNLLFFFLVFSFQFSNVHYLPSTTVYISAYAINTKGWVIVQNEDDGVWDRFCSAFLGTERKISHRNFVGEVRVCRRKGTKIGEHDGCRGAVKVVAVVANYKGGEGNGEAWTGLGKNNHVQKVYVAMAHDNGGLRVTVMMTCRVWWFRR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo118g00008 377 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo118g00008 377 MobiDBLite consensus disorder prediction 204 220 - -
Pumo118g00008 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Pumo118g00008 377 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 161 - -
Pumo118g00008 377 SUPERFAMILY Protein kinase-like (PK-like) 1 162 IPR011009 -
Pumo118g00008 377 Pfam Protein kinase domain 2 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo118g00008 377 MobiDBLite consensus disorder prediction 196 224 - -
Pumo118g00008 377 Gene3D Transferase(Phosphotransferase) domain 1 1 171 - -
Pumo118g00008 377 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo118g00008 2 156 EF-hand Containing Proteins AT2G38910 45.570 5.73e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo118g00008 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo118g00008 - K08794 gmx:547731 308.145