Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo118g00003 ATGGAACGTGGGGTTCTTGATAGCATCATCAATAGGCTGCTCGAAGTGAGAGGCAGACCCGGGAAGCAGGTTCAACTTTCTGAGGCTGAGATCAAACAGCTTTGTCTTGTCTCCAGGGATATCTTCATGAGGCAGCCCAACCTCTTGGAACTCGAGGCACCAATTAAGATCTGTGGAGATGTCCATGGTCAATATTCCGACCTTCTGCGACTTTTTGAGTATGGTGGATTGCCTCCTCGTTTTAATTACTTATTCTTAGGGGACTATGTTGATCGTGGGAAGCAAAGTTTGGAGACAATATGTCTCCTTCTGGCTTATAAAATAAAATATCCCAACAACTTTTTCCTTCTGAGGGGCAACCATGAATGTGCTTCTATAAACCGCATCTATGGATTCTATGACGAGTGTAAACGAAGGTACAATGTGAAGCTTTGGAAAGTGTTCACAGAGTGCTTCAACTGCTTGCCAGTGGCAGCTCTAATTGATGAAAAGATACTCTGTATGCATGGTGGACTCTCTCCTGAGTTACACAATTTGAATCAGATAAAGAGTTTGCCACGTCCTATTGAAGTGCCTGAAACTGGTCTACTATGTGACCTCCTTTGGTCTGATCCTTGTGGTGACATTCGGGGTTGGGGAGAGAACGAACGCGGAGTTTCCTATACTTTTGGTGCTGACAGGGTGACAGAATTCCTTCAGAAGCATGATCTTGATTTGATTTGCAGGGCCCATCAGGTTGTGGAAGACGGATATGAATTCTTTGCTAACAGACAACTTGTAACTATCTTCTCGGCACCTAACTACTGTGGAGAGTTTGACAATGCTGGTGCTATGATGACTGTTGATGAGACACTTGTGTGCTCTTTTCAAATATTGAAGCCTGTAGAAAAAAAGCCTAATAAGTTTGGCTTTGGGAGCACAACTACAGTTAAGCATAGTAGTCCAACAAAAAGCAAGGTTCTAGCAGTGGAAATAGCCTTTCTGCTCACTTGGATAAGGTTGTGTCCATCTAACCCTCCCTAG 1023 0.4379 MERGVLDSIINRLLEVRGRPGKQVQLSEAEIKQLCLVSRDIFMRQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPRFNYLFLGDYVDRGKQSLETICLLLAYKIKYPNNFFLLRGNHECASINRIYGFYDECKRRYNVKLWKVFTECFNCLPVAALIDEKILCMHGGLSPELHNLNQIKSLPRPIEVPETGLLCDLLWSDPCGDIRGWGENERGVSYTFGADRVTEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMTVDETLVCSFQILKPVEKKPNKFGFGSTTTVKHSSPTKSKVLAVEIAFLLTWIRLCPSNPP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo118g00003 340 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Pumo118g00003 340 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Pumo118g00003 340 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 298 - -
Pumo118g00003 340 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pumo118g00003 340 Gene3D - 2 304 IPR029052 -
Pumo118g00003 340 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Pumo118g00003 340 CDD MPP_PP1_PPKL 5 294 - -
Pumo118g00003 340 SUPERFAMILY Metallo-dependent phosphatases 18 299 IPR029052 -
Pumo118g00003 340 SMART pp2a_7 26 296 IPR006186 GO:0016787
Pumo118g00003 340 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo118g00003 33 239 Calmodulin-binding Proteins AT5G63870 30.364 4.94e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo118g00003 K06269 - gmx:100791655 641.343