Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo111g00005 ATGGACGAAAAATTCCAAAATCTAAAAGTCATGGTAATTGATGATTCAAAAACCATTCGTCGTACAGCGGAAACATTGTTGCAACGTGAGGGTTGTGAAGTTGTAACTGCGGTAGATGGTTTTGAAGCCTTATCAAAGATTGCACAAGTAAACCCAGATATTGTTTTTGTCGATATTATGATGCCGCGTTTAGATGGTTATCAAACCTGTGCATTAATCAAGAATTCTCAAAATTATCAAAATATTCCAGTCATTATGCTGTCAAGTAAAGACGGTTTATTTGATCAGGCAAAAGGTCGTGTTGTGGGTTCGGATGAATATTTAACCAAACCCTTTAGTAAAGATGAATTGCTCAATGCAATTCGTAATCATGTAACCGCATAA 384 0.3594 MDEKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAQVNPDIVFVDIMMPRLDGYQTCALIKNSQNYQNIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo111g00005 127 Pfam Response regulator receiver domain 10 122 IPR001789 GO:0000160
Pumo111g00005 127 PANTHER STRESS RESPONSE REGULATOR PROTEIN 1 9 125 - -
Pumo111g00005 127 Gene3D - 7 127 - -
Pumo111g00005 127 SUPERFAMILY CheY-like 6 125 IPR011006 -
Pumo111g00005 127 SMART REC_2 8 121 IPR001789 GO:0000160
Pumo111g00005 127 ProSiteProfiles Response regulatory domain profile. 9 125 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo111g00005 8 111 Response Regulator Gene Family AT1G19050 29.565 2.34e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo111g00005 Response_reg 7.4e-28 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo111g00005 K02657 - acb:A1S_2815 241.121