Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02914 ATGCAGTCCGTTAGTGAATTGGTTGAGCCCTTCAAATTTGATGTGTTCATCTGCTTCAGAGGCGCAGATACCCGTTACACTTTTACCGCCGACCTCCACAATGCTCTCCGTCGGCTATTCAATACCTTCAAGGATGATTGCGAAATTAAGAAAGGGCTCAAAATCGAGGTAGAGCTTCCCAAGGAAATTAAGGGATCCAGGATTTTTATTATAGTTTTGTCCAAGGATTTTGCTTCTTCTGCATTTTGCTTGGACGAAATTGTTCAAATTCTTGATCTGTCCGATAAGGCGAAAGGTCGATATGTTCTGCCGATTTTCTTCTACGTGGATCCGTCTGCTCTGGCCTCTACTTTTGAAGAAGCGTTGACTGATCACAAGAAGTGGTTTACAGATGAGCGGATACAAAAATGGAGGAATGCTTTCATACAATTATCTAAAATTCCTGGCTTCCGTCTCAACCGTGACGACAATATAACTGAAAACAAGCATATTGAGAATATCCTTAGAGAGGTCTCTAGACATGTTACTGTCCCAGTTGGACTTAGTAAACGGGTACAGGAAGTTACCTCGCTTTGGTCCTCTGCATCAGTTGGAGTTGACATAATTGGGATATGTGGAAAAGCTGGAATGGGTAAAACAACTGTTGCCCATGGAGTTTATAATGACAATGCTAACATGGAATCTCATCATTTTGATGGCTATTACCTTTTTTATGACGTGGGAAAAAATTCAAGTTTTCAATTGTCACAACTCAAGAAAAAAAAGGTTTTTATAATTTTTGAAGATGTTGAAGATTCCGATCAGTTGAAAAAGATTAAGAAACTAACTAAGCCACTTGGTCGTGGCAGCAAAGTGATCATTACATCTGAAAATAAGCATTTGCTTCAAAGTTGTGGGATTAAAAGTATATATGAAGTAGAAAGGCTTAGTGAAACAGAAGCATATGATTTGCTTGCTTTGAAACTTTTCAATTCTACTTGGGTTGAAAGTGCATACCTGGACATAATAATCCGTATTGAGAAATTTGCCCTTGGTCATCCACAGACTTTGGAATTAATAGGTTCCATCTTGATTGGAAAATCAAAAGAAGAATGTGTATCTGCGTTAAGTAAGTATGAGCAAATGACAAATACAGACATCCAAATGATACTAAAAGACAGCTTTAATGCTTTGGAGGAACCACAACGAAAGATGTTAATTCACATTGCATTCTTCCTCAAACAATTGCAATTGGTACAAGTTGAAGCCAAACTTCCTAATGATTATGAAGACTGTCCCAGAAAACATATTAGAGTGTTGCTCGATAAATCTCTTATAAAAGTTAATCAGCTCGGTCAGGTGACATTACATACCTCTACATGGAAGATGGTTGAGAACAGGAGTATGGAAAGAAAGAAATCCAATGCATCTCAAATGAAGAAAGCAAGAATCTGGATCCAATGTTATTAG 1449 0.3789 MQSVSELVEPFKFDVFICFRGADTRYTFTADLHNALRRLFNTFKDDCEIKKGLKIEVELPKEIKGSRIFIIVLSKDFASSAFCLDEIVQILDLSDKAKGRYVLPIFFYVDPSALASTFEEALTDHKKWFTDERIQKWRNAFIQLSKIPGFRLNRDDNITENKHIENILREVSRHVTVPVGLSKRVQEVTSLWSSASVGVDIIGICGKAGMGKTTVAHGVYNDNANMESHHFDGYYLFYDVGKNSSFQLSQLKKKKVFIIFEDVEDSDQLKKIKKLTKPLGRGSKVIITSENKHLLQSCGIKSIYEVERLSETEAYDLLALKLFNSTWVESAYLDIIIRIEKFALGHPQTLELIGSILIGKSKEECVSALSKYEQMTNTDIQMILKDSFNALEEPQRKMLIHIAFFLKQLQLVQVEAKLPNDYEDCPRKHIRVLLDKSLIKVNQLGQVTLHTSTWKMVENRSMERKKSNASQMKKARIWIQCY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02914 482 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 149 IPR035897 -
Pumo10g02914 482 Pfam NB-ARC domain 250 390 IPR002182 GO:0043531
Pumo10g02914 482 Pfam NB-ARC domain 190 235 IPR002182 GO:0043531
Pumo10g02914 482 Gene3D - 249 304 IPR027417 -
Pumo10g02914 482 Gene3D - 1 145 IPR035897 -
Pumo10g02914 482 ProSiteProfiles TIR domain profile. 11 175 IPR000157 GO:0007165
Pumo10g02914 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 401 IPR027417 -
Pumo10g02914 482 PRINTS Disease resistance protein signature 201 216 - -
Pumo10g02914 482 PRINTS Disease resistance protein signature 343 357 - -
Pumo10g02914 482 Pfam TIR domain 12 180 IPR000157 GO:0007165
Pumo10g02914 482 SUPERFAMILY "Winged helix" DNA-binding domain 379 449 IPR036390 -
Pumo10g02914 482 Gene3D - 157 248 IPR027417 -
Pumo10g02914 482 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 479 IPR044974 GO:0006952
Pumo10g02914 482 SMART till_3 12 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02914 Pumo-Chr10 58898641 58900639 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02914 13 478 WRKY Transcription Factor Family AT4G12020 23.611 6.39e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02914 - - gmx:106795499 477.248