Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02908 ATGGCAGTTTCAGAAGGTATGGTTCGGCGCTACGTTTATGATGTTTTCCTCAGCTTCAGAAGAAAAGACACTAGGCTCGGTTTTGTTGGGAATCTCGACAAAGCTCTGAAGGAAAAGGGGATCCATACCTTCGTTGACGACAACCTTAGGAGAAGAGAGGAAATTACACCATCACTTGTGGAGGCAATTGAACGTTCCAGGCTTTCCATTGTAGTGTTCTCTGAGAACTATGCTTCTTCTACATTTTGCTTGGAGGAACTTGCCCGAATCATTCACTTCTCTAAGGGTAACCGTCAACTGGTTATTCCAGTTTTCTATCACGTTGATCCATCTGATGTGAGACATCAGACGGGGATCTATGGTGAAGCGCTGGATATGCACGATAAATCCAACTTAGAGTCAGAGAAAGTCATGAAATGGAGGAAAGCACTGCGTGAAGCTGCTGACTTGTCCGGTTGGCCTTTCAAACATGGGGACGGATTTGAATACGAGTTGATTGAGAAGATCGTTGACAGTGTCTCCAAGAAGATTAATCCATCCGTTGCATATCGCCCAATTGGGCTCGATTATCGAATGCATGAACTAATCTGGCTCCTGGATCCCACGCCCCTCAGTGGAGTCGATTTTATAGGGGTTTATGGTGTCGGAGGGATTGGCAAAACAACACTTGCTCGTGCAATCTATGATTCATTTGCTGTCCAATTTGATGATTTATGTTTCCTTGACGAAGTGAGAGAAAATACAATGAAACGTGGCTTGCTGCATCTCCAACAGACCATTCTTGCTGAAACAGTCGGAGAGAAGGATATTCGATTTCCAAGTGTCAAGCAAGGAATTTCACTACTAAAGCAGTGGCTCTGCAAGAAGAAGGTTCTTTTGGTTCTTGATGATGTCGATAACTCAGAGCAGTTGCAGGCACTTGTTGGAAGGCCAGATTGGTTTGGTCTTGGCAGCAGAGTCATCATTACGACTCAGCACAGACAGTTGCTCGAGCATCATGGGGTTAAGAAAATATATCAGGTGGAAAATTTAGCCGACGGTGAAGCTCTCGAATTGCTCTGTTGGAAGGCTTTCAAAACTGACACAGTATATCCAAATTTCATTAATAAAATTAACCGTGCAATTACTTATGCTTCTGGCATTCCTTTGGCTCTCGAAGTTATAGGTTCAAACTTGTTTGGAAGAGAAATAGAACAATGGGAATATGCCTTAGATCTCTATGAAAATATACATGATAAAGATATGCACATGACACTTAAAGTAAGCTTTGATGCTTTGGATGAGCAGGAGAAGCAGGTTTTTCTTGACATCGCATGTTTCTTCAAGGGATTTGAATTAGCAGAGGTTGAAGATATACTTGCTGCTCATTATGGTTACTGTTTGAAACCTCACATTGGAGCGTTGGTTGAAAAATCTCTTATAAAGATTGATGAGCATAGTTGTGTGAAGATGCATGATTTGATACAGCAAATGGGCAGAGAAATTGTTCGACAGGAATCACAGGAACACCCTGGTAAACGCAGTAGGTTATGGTCTACTGAGGATATAGTTCGTGTTTTAGAAGAAAATATGGGAACCTGTAATATTCAAAGTATAATTCTGGATTTCTCCAAACCCAAAGAAGTGATACAATGGGACGGAATGACCTTTATGGAGATGACAAGCCTTAGAACACTTATTATTAAAAAGGAGTGTTTTTCTGAAGGTCTGAAAAAACTTCCAAATAGCTTAAGATTGCTGAAATGGTGGGGATATCCTTCAAAGTCTTTACCATCTGATTTTCAGCCAGAGAAACTAGCTGTATTGAAGTTGCCTTCTAGTTGCTTTATGTCACTCGAGTTGCCAAGCTTTTCTCACATGAGAGTTTTGAATTTTGACAACTGTGAAGTTATGACACGGATACCTGATTTATCTGGTGCCCCAAATTTGAAAGAATTATCTTTTGTTTTTTGTGAGAATGTAGTTGAAATTCATGAATCGGTTGGATTCCTAGATAAACTTGAAATCTTGAACGTTGAGGGTTGCAGCAAGCTTGGGACGTTTCCACCAATTGAGTTGACCTCTCTTGAAAGCATCAACCTTTCATATTGTTCAAGTCTTGTGAGTTTTCCCGAAATATTAGGAAAAATGGAAAACATAACACATCTTTCTTTGGAGTACACTGCCATAAGTAAATTGCCACATTCAATTAGAAAACTTGTCCGACTTGAAGATTAG 2217 0.4051 MAVSEGMVRRYVYDVFLSFRRKDTRLGFVGNLDKALKEKGIHTFVDDNLRRREEITPSLVEAIERSRLSIVVFSENYASSTFCLEELARIIHFSKGNRQLVIPVFYHVDPSDVRHQTGIYGEALDMHDKSNLESEKVMKWRKALREAADLSGWPFKHGDGFEYELIEKIVDSVSKKINPSVAYRPIGLDYRMHELIWLLDPTPLSGVDFIGVYGVGGIGKTTLARAIYDSFAVQFDDLCFLDEVRENTMKRGLLHLQQTILAETVGEKDIRFPSVKQGISLLKQWLCKKKVLLVLDDVDNSEQLQALVGRPDWFGLGSRVIITTQHRQLLEHHGVKKIYQVENLADGEALELLCWKAFKTDTVYPNFINKINRAITYASGIPLALEVIGSNLFGREIEQWEYALDLYENIHDKDMHMTLKVSFDALDEQEKQVFLDIACFFKGFELAEVEDILAAHYGYCLKPHIGALVEKSLIKIDEHSCVKMHDLIQQMGREIVRQESQEHPGKRSRLWSTEDIVRVLEENMGTCNIQSIILDFSKPKEVIQWDGMTFMEMTSLRTLIIKKECFSEGLKKLPNSLRLLKWWGYPSKSLPSDFQPEKLAVLKLPSSCFMSLELPSFSHMRVLNFDNCEVMTRIPDLSGAPNLKELSFVFCENVVEIHESVGFLDKLEILNVEGCSKLGTFPPIELTSLESINLSYCSSLVSFPEILGKMENITHLSLEYTAISKLPHSIRKLVRLED 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02908 738 Gene3D - 7 174 IPR035897 -
Pumo10g02908 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 437 IPR027417 -
Pumo10g02908 738 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Pumo10g02908 738 SUPERFAMILY L domain-like 550 737 - -
Pumo10g02908 738 Pfam TIR domain 13 181 IPR000157 GO:0007165
Pumo10g02908 738 Gene3D - 175 338 IPR027417 -
Pumo10g02908 738 SUPERFAMILY "Winged helix" DNA-binding domain 417 521 IPR036390 -
Pumo10g02908 738 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Pumo10g02908 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 711 IPR044974 GO:0006952
Pumo10g02908 738 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Pumo10g02908 738 Gene3D Ribonuclease Inhibitor 488 737 IPR032675 -
Pumo10g02908 738 SMART till_3 12 150 IPR000157 GO:0007165
Pumo10g02908 738 Gene3D - 343 427 IPR042197 -
Pumo10g02908 738 Pfam NB-ARC domain 198 409 IPR002182 GO:0043531
Pumo10g02908 738 PRINTS Disease resistance protein signature 378 392 - -
Pumo10g02908 738 PRINTS Disease resistance protein signature 684 700 - -
Pumo10g02908 738 PRINTS Disease resistance protein signature 285 299 - -
Pumo10g02908 738 PRINTS Disease resistance protein signature 209 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02908 Pumo-Chr10 58714890 58717785 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02908 13 737 WRKY Transcription Factor Family AT4G12020 31.600 9.56e-87 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02908 - - gmx:547614 1039.25