Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02904 ATGGCAACCTCGAGTCTCTTGGTTGACCCAATAGTCTTCCCAAATTATTATGTGTTGCTGAGCTGCGCCGATGACACCCACAGCGGTTTTTGGGGAGATCTTCTCAATGCTCTCGGAGTGGTCGAATTCCGTACCACCAAAGATTGTGAACAAGAGGAGCTTGAGAGAAATGTAATTGAAGAAGCCATGGCTTACGTTGTTATCTTATCCAAGCGCTATCTATCTTGTCCATCTTGCTTGGATAAACTTGCTGAGATCAGCGAGGGGAGTGTAGGTCGATTATTTCTGCCCGTTTTGCACGACGTGAAACCCTCTGATGTGGAACATCAGATAGATAGTTATAGGAACAGTGTCGAGCCTGAGAATTTCGAGAGATGGATTCAGGCTCTGACTAAAGTGCTTGAAGCAGTGCCTGACTTCACTCCCTGTCATTTCCAACGGGACGGTGATACATTTGTATACAAGTGTATTGAGAAGATCGTTCAAGTGATCCTTAAATACGCTGCTTCCACAATTGGACAAGATCCTCAGGAGACGCAAGTTATCCAGCTTTTGAATTTCGGATCTGAGGATGGAGTCCGCGTGGTTGGGATAGGTGGAGATCCTCGAATTGGTAAGAGAATAGCTCGTAGAGTTTATGACTTCATTGCTGGCGAAGACTTTGATAGCTATTGCTTTCTTAACGTGGAAGAAAATTTAAGGGGACCTACATCCGGACATTTCAAAAGCATGTTTTCCTCCGGAATGGTTGGCAACAATCCTGGAATATCAATAACAAAGAGTACACTCAACCTAATGAAGGTGTTCGTAGTTTTCCCAGGCATTAACGATCCGAATTGGTTGCAATATGCTCTAGAGCTAATCAATGAGTTTGGTTCTGGGAGCAAAGTTATAGTTACATCTCAAAATATAGGTTTGCTTCAAGGAGTTTATCAAGCAGAAAGAACAACAGTAAGATATGTGATAGTTGGAGACAGCGCTGAAATTCGTGCTTCTGGCCATCTGTTGGAACAGGAGTATGGCGGCATGCGAGATGCCCAACCAGCCTCAGCTGATAGAAGCAGGAATTGGGATCCGATGGAATTGGAATATCAACTCAGCTCTTCCTCTTCTTCCCTGGATGCTTTATGA 1131 0.4421 MATSSLLVDPIVFPNYYVLLSCADDTHSGFWGDLLNALGVVEFRTTKDCEQEELERNVIEEAMAYVVILSKRYLSCPSCLDKLAEISEGSVGRLFLPVLHDVKPSDVEHQIDSYRNSVEPENFERWIQALTKVLEAVPDFTPCHFQRDGDTFVYKCIEKIVQVILKYAASTIGQDPQETQVIQLLNFGSEDGVRVVGIGGDPRIGKRIARRVYDFIAGEDFDSYCFLNVEENLRGPTSGHFKSMFSSGMVGNNPGISITKSTLNLMKVFVVFPGINDPNWLQYALELINEFGSGSKVIVTSQNIGLLQGVYQAERTTVRYVIVGDSAEIRASGHLLEQEYGGMRDAQPASADRSRNWDPMELEYQLSSSSSSLDAL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02904 376 Pfam TIR domain 57 174 IPR000157 GO:0007165
Pumo10g02904 376 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 134 IPR035897 -
Pumo10g02904 376 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 310 IPR044974 GO:0006952
Pumo10g02904 376 Gene3D - 14 140 IPR035897 -
Pumo10g02904 376 Gene3D - 157 316 IPR027417 -
Pumo10g02904 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02904 Pumo-Chr10 58393554 58394912 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02904 55 303 WRKY Transcription Factor Family AT4G12020 23.954 1.45e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02904 - - mtr:11444571 157.147