Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02902 ATGTATCTGCCGGTCAATGCTAATGTGTGTCTGGAGCGAGACTGTACCTCAATGATCATCCAGACCGGATATGGGGCAGACATTGCGCGAGGAATTGTCGAGCTTCATGCTGCAGGCATTGTTTGCATGAATATAAAGCCATCCAATCTTCTTCTTGATTCAAATGGTCATGCAGTGGTGTCTGATTATGGGCTTGCTTCTATTCTGAAGAAGCATTCCTGTTGGAAGGGCCAACCTGAGTGTGACTCCTCAAAGACTCACTCCTGTACGGAATGTACAGTGCTCAGCCCACATTACACAGCTCCAGAGGCTTGGGGCCAACCTGTTAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCAGCAGAGTCTGATGCCTGGAGTTTTGGTTGTACACTGGTGGAGATGTGCACGGGTTCTGTTCCTTGGGCTGGTTTAAGTTCGGAGGAAATTTATCACGCAGTTGTCAAGGCAAAGAAACTGCCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATACCGAGTGACTTGTGGAGGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGGCCTAGTTTTAATGCAATGGAATACCGCGCAGCCTTCCTGCAAGCCCTGATAAGAATTTTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATTTGTCCTGCAAAGAGCAGTTGCAAAGAAGTCCACTGACTGTGCCCTTGTGATACTGGAAAATGGGGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAATATGACACCGCTGCACTTGTGTGTGGCAACATGGAATGTTGCCGTTGTAAAAAGATGGGATGAAGTTACAACTTCTGATGAGATTGCTGAATCAATTAACATCCTGAGCCCTATGGGCACTGCTTTGTGTATGGTTGCTGCCTCTAAGAAAGATCATGAAAGTGCAAACAATAGTATTAAAACAGCACAAGGTGCGCCACAAATATACAGAGAAGTATGTAAAGAAGCAATTGCTTCAAACCACCCACAACATACTAAGACTACACCCCAGCTATATTAA 1071 0.4491 MYLPVNANVCLERDCTSMIIQTGYGADIARGIVELHAAGIVCMNIKPSNLLLDSNGHAVVSDYGLASILKKHSCWKGQPECDSSKTHSCTECTVLSPHYTAPEAWGQPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWAGLSSEEIYHAVVKAKKLPPQYASVVGGGIPSDLWRMIGECLQFKPSKRPSFNAMEYRAAFLQALIRILLLAGADPNAVDDEGEFVLQRAVAKKSTDCALVILENGGCRSMAILNSKNMTPLHLCVATWNVAVVKRWDEVTTSDEIAESINILSPMGTALCMVAASKKDHESANNSIKTAQGAPQIYREVCKEAIASNHPQHTKTTPQLY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02902 356 Gene3D - 209 353 IPR036770 -
Pumo10g02902 356 Gene3D Transferase(Phosphotransferase) domain 1 19 208 - -
Pumo10g02902 356 SUPERFAMILY Ankyrin repeat 211 283 IPR036770 -
Pumo10g02902 356 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 24 213 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pumo10g02902 356 SUPERFAMILY Protein kinase-like (PK-like) 22 203 IPR011009 -
Pumo10g02902 356 Pfam Protein kinase domain 24 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02902 356 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02902 Pumo-Chr10 58299114 58305760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02902 24 197 MAP Kinase Kinase Kinase AT4G08500 28.409 2.67e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pumo10g02902 Pkinase 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02902 K16279 - gmx:100783181 359.377