Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02888 ATGGCTGATGCAGGATGGTCGTCTTATGATGTTTTCGTGAGCTTCAGAGGGTCCGATACGAGGCTCGGTTTTGTGGGGCATCTCTACAAAGCTCTGAATCAAAGGGGATTCCGTACGTTCGTTGACGACGATGAGCTTAGGAGAGGAGACAAAATCTCAGCCTCACTTGTCAAGGCAATTGAAGCATCCGTGATTTCTGTTGTAGTATTCTCTGAGAACTATGCTTCTTCGGAGTGGTGTTTGGATGAACTTGCCCAGATCTTGGAGAGCCGTCGATTGGTTCTGCCAGTTTTCTATTACGTTGATCCCTCCGATGTGAAACATCAGAAGGGGATCTATGGAGAAGCACTCGCTATGCTTCGCAAATCCAACACTGACTCAGACAAACTCATCAAATGGAGGAGCGCACTGCATCAAGCTGCTGACTTGCCCGGCTTTCATTTCAGACATGGTGACGGATATGAATACGAGTTGATTGGGAAGATCGTTGACTACGTCTCCAAGAAGATTAATCGACCTGCTGCTGCAGATCGCTCAGTTGGCCTTGAGTATCGAATGCTTGAACTAAACTGGCTTCTGGATGCCTCATCTGATGGAGCCCGTGTCATAGGGATTTGTGGAATGGGTGGCATAGGAAAAACCACACTTGCTCGTGCAGTCTATGATTCTGTTGCTGTCCAATTTGATGCGCCATGTTTCCTTCATGAGGTGAGAGAAACTGCTATCAAACATGGCTTGGTGCATCTTCAAGAGACCCTGCTTGCTGAATTAGTTGGAGGAGACAAGGATATTAAATTGCCAAGTGTCCGTCTAGGAATTTCAATAATTAAGCAGAGGCTCTGCAAGAAAAAGGTTTTGGTGGTTCTTGATGACGTGAATGAGCCAGCGCATTTGAATGCACTTGTTGGAAGGCCAGATTGGTTTGGTCCTGGCAGTAGAGTCATTGTTACAACCCGGGACAGACAGTTGCTTCAAACTCATGGGGTTGACAAAATATATGAGGTAGAAAAGTTATCCGATGGTGAAGCTCTTGAATTGCTTTGTTGGAAGGCTTTCAAAACTGACAAAGTTTATCCAAATTTCGTTGATATGCTAAACCGTGCAATAACTTATGCTTCTGGCATTCCTCTGGCTCTCGAAGTCATAGGTTCAAACTTGTTTGGAAGAACAGAAGAATGGGAATCTACTTTAGATTGGTATGAAAAAATCCCCAATAATAAAGATATACAAAACGTACTCAAAATGTCCTTTGAAGCTTTGGGTGAACACGAGAAGGAGGTTTTTCTTGACATCGCATGTTTCTTCAATGGATTTGAATTAGCAGAGATCGAACATATACTCAGTGCTCATCATGGTGACAGTTTGAAACCCCACAATCCCATTCAAGCATTGGTTGAAAAATCTCTTATAAAAATTGATGAGCATGCCCATGTGAAGATACATGATTTGATACAAGAAATGGGTAGAGAAATTGTCCAACAGGAATCACGGGAACACCCTGGTAAACGCAGTAGGTTATGGTCTACTAATGATATAGTTCGTGTTTTAGAAGAAAATACGGGAACGTGTAAAATTCAAAGTATAGTTCTGGATTTCTCCAAACTTGAAAAAGTGGTACAATGGGATGGAATGGCCTTCATGAAGATGACAAACCTTAGAACACTTATTATTAGAAAGGAGTGCTTTTCCAAAGGTCCGAAAAAACTTCCAAATAGCTTGAGAGTGCTGGAATGGTGGGGATATCCGTCAGAGTCTTTACCATCCGATTTTCAGCCAGAGAAACTAGCTATATTGAAGTTACCCTACAGTTGCTTTATGTCACTTGAGTTGCATAAGTATTTGAATATGAGAGTTTTGAATTTTGACAAGTGTGAATTTATAACACGGATACCTGAGTTATCTGGTGCCCCAAATTTAAAAGAATTATCTTTTGTCTTTTGTGAGAATTTATTTGAAATTCATGAATCAGTTGGCTTCCTAGATAAACTTGAAATCTTGAACTTTGATGGTTGCAGCAAGCTTTGGACTTTTCCACCAATCAAGTTGACCTCTCTTGAAAGCATAAACCTTTCATATTGTTCAAATCTTGTGAGTTTTCCTGAAATATTTGGAAAAATGGAAAACATAACACATCTTTCTTTGGCCTACACTGCCATAAGTGAAATACCCTATTCAATTGGAAATCTTATTCGGCTTCAAAGGTTGGAGCTGCACAGCTGTGGAATGGTTCAGTTGCCAAGTAGCATTGCCATGTTGCCAGAACTTGAAGTGTTGAGCATTGGGCAATGTGAAGGGTTGCAATCTGCTAAACAGGACAGAGGTGTAGAAAAAGAGAGTTCAATGGTGTTTTCAAACGTGAAACATATTGATTTCTTGTCCTGCAATATATCAGATGAATTCATTGAAATAGGGCTTGCTTGGTTTGTCAACGTGAAAGAGTTAGACCTTTCAACAAATAATTTCACAATTCTTCCTTCATGCATCAAAGAATGTCACCTTTTGAGGAAACTTAATTTGGATTACTGCATGCATCTTCGAGAAATTGGAGGGATTCCACCCAATTTAGAGACATTATCTGCAATACGGTGCACGTCATTGAAAGATTTAGACCTCACAGTTCTTGCATCCACCAAAGAATGCTGCTTTTTGAGAGAACTTATTTTGGATGATTGCGATAGTCTTCAAGAAGTCAGAGGGATTTCACCAAACATAGAAATTTTGTCTGCAACAAACTGCAGATCCTTGACTGCCTCGTGTAGAAGAATGTTACTGAAACAGGAGTTGCATGAAGCTGGAAATAAGAGATTTTGTTTGCCTGGAACAAGGATTCCAGAATGGTTTGAGCATTGTAGCAGGGGACAGTCAATTTCTTTTTGGTTTCGTAACAAGTTCCCAGCGATATCTCTCTGTCTTGCTGGACTCATGCATAAGCACCCTATTGGATTTAAACCTATTGTGTCCATTAATGGCCGTAAAATGAAGACAGGGTTCCATACTGAATTGTTTAATTTTGAGTTCCCAGTATTGACTGATCATATACTTGCCTTTGGTGAAAGACAAGTTAAATTTGAAGATAATGTGGATGAAGTACCTTCAGAAAATTTGAAGATATTGATTTCAAATGGAACCCAACAGAACAGTTTGTTGTGCGAACTGGACTCCATGTAA 3168 0.4044 MADAGWSSYDVFVSFRGSDTRLGFVGHLYKALNQRGFRTFVDDDELRRGDKISASLVKAIEASVISVVVFSENYASSEWCLDELAQILESRRLVLPVFYYVDPSDVKHQKGIYGEALAMLRKSNTDSDKLIKWRSALHQAADLPGFHFRHGDGYEYELIGKIVDYVSKKINRPAAADRSVGLEYRMLELNWLLDASSDGARVIGICGMGGIGKTTLARAVYDSVAVQFDAPCFLHEVRETAIKHGLVHLQETLLAELVGGDKDIKLPSVRLGISIIKQRLCKKKVLVVLDDVNEPAHLNALVGRPDWFGPGSRVIVTTRDRQLLQTHGVDKIYEVEKLSDGEALELLCWKAFKTDKVYPNFVDMLNRAITYASGIPLALEVIGSNLFGRTEEWESTLDWYEKIPNNKDIQNVLKMSFEALGEHEKEVFLDIACFFNGFELAEIEHILSAHHGDSLKPHNPIQALVEKSLIKIDEHAHVKIHDLIQEMGREIVQQESREHPGKRSRLWSTNDIVRVLEENTGTCKIQSIVLDFSKLEKVVQWDGMAFMKMTNLRTLIIRKECFSKGPKKLPNSLRVLEWWGYPSESLPSDFQPEKLAILKLPYSCFMSLELHKYLNMRVLNFDKCEFITRIPELSGAPNLKELSFVFCENLFEIHESVGFLDKLEILNFDGCSKLWTFPPIKLTSLESINLSYCSNLVSFPEIFGKMENITHLSLAYTAISEIPYSIGNLIRLQRLELHSCGMVQLPSSIAMLPELEVLSIGQCEGLQSAKQDRGVEKESSMVFSNVKHIDFLSCNISDEFIEIGLAWFVNVKELDLSTNNFTILPSCIKECHLLRKLNLDYCMHLREIGGIPPNLETLSAIRCTSLKDLDLTVLASTKECCFLRELILDDCDSLQEVRGISPNIEILSATNCRSLTASCRRMLLKQELHEAGNKRFCLPGTRIPEWFEHCSRGQSISFWFRNKFPAISLCLAGLMHKHPIGFKPIVSINGRKMKTGFHTELFNFEFPVLTDHILAFGERQVKFEDNVDEVPSENLKILISNGTQQNSLLCELDSM 1055
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02888 1055 Gene3D - 6 170 IPR035897 -
Pumo10g02888 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 431 IPR027417 -
Pumo10g02888 1055 Gene3D - 171 332 IPR027417 -
Pumo10g02888 1055 Pfam TIR domain 9 169 IPR000157 GO:0007165
Pumo10g02888 1055 SUPERFAMILY "Winged helix" DNA-binding domain 408 517 IPR036390 -
Pumo10g02888 1055 Gene3D Ribonuclease Inhibitor 454 698 IPR032675 -
Pumo10g02888 1055 SUPERFAMILY L domain-like 539 892 - -
Pumo10g02888 1055 PRINTS Disease resistance protein signature 372 386 - -
Pumo10g02888 1055 PRINTS Disease resistance protein signature 279 293 - -
Pumo10g02888 1055 PRINTS Disease resistance protein signature 202 217 - -
Pumo10g02888 1055 PRINTS Disease resistance protein signature 680 696 - -
Pumo10g02888 1055 ProSiteProfiles TIR domain profile. 7 170 IPR000157 GO:0007165
Pumo10g02888 1055 SMART till_3 8 143 IPR000157 GO:0007165
Pumo10g02888 1055 Pfam NB-ARC domain 190 399 IPR002182 GO:0043531
Pumo10g02888 1055 Gene3D Ribonuclease Inhibitor 699 923 IPR032675 -
Pumo10g02888 1055 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 172 - -
Pumo10g02888 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 784 IPR044974 GO:0006952
Pumo10g02888 1055 Gene3D - 337 421 IPR042197 -
Pumo10g02888 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 146 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo10g02888 Pumo-Chr10 57975391 57979632 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02888 9 767 WRKY Transcription Factor Family AT4G12020 32.661 3.32e-92 322
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02888 - - gmx:100817027 1489.17