Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo10g02888 | ATGGCTGATGCAGGATGGTCGTCTTATGATGTTTTCGTGAGCTTCAGAGGGTCCGATACGAGGCTCGGTTTTGTGGGGCATCTCTACAAAGCTCTGAATCAAAGGGGATTCCGTACGTTCGTTGACGACGATGAGCTTAGGAGAGGAGACAAAATCTCAGCCTCACTTGTCAAGGCAATTGAAGCATCCGTGATTTCTGTTGTAGTATTCTCTGAGAACTATGCTTCTTCGGAGTGGTGTTTGGATGAACTTGCCCAGATCTTGGAGAGCCGTCGATTGGTTCTGCCAGTTTTCTATTACGTTGATCCCTCCGATGTGAAACATCAGAAGGGGATCTATGGAGAAGCACTCGCTATGCTTCGCAAATCCAACACTGACTCAGACAAACTCATCAAATGGAGGAGCGCACTGCATCAAGCTGCTGACTTGCCCGGCTTTCATTTCAGACATGGTGACGGATATGAATACGAGTTGATTGGGAAGATCGTTGACTACGTCTCCAAGAAGATTAATCGACCTGCTGCTGCAGATCGCTCAGTTGGCCTTGAGTATCGAATGCTTGAACTAAACTGGCTTCTGGATGCCTCATCTGATGGAGCCCGTGTCATAGGGATTTGTGGAATGGGTGGCATAGGAAAAACCACACTTGCTCGTGCAGTCTATGATTCTGTTGCTGTCCAATTTGATGCGCCATGTTTCCTTCATGAGGTGAGAGAAACTGCTATCAAACATGGCTTGGTGCATCTTCAAGAGACCCTGCTTGCTGAATTAGTTGGAGGAGACAAGGATATTAAATTGCCAAGTGTCCGTCTAGGAATTTCAATAATTAAGCAGAGGCTCTGCAAGAAAAAGGTTTTGGTGGTTCTTGATGACGTGAATGAGCCAGCGCATTTGAATGCACTTGTTGGAAGGCCAGATTGGTTTGGTCCTGGCAGTAGAGTCATTGTTACAACCCGGGACAGACAGTTGCTTCAAACTCATGGGGTTGACAAAATATATGAGGTAGAAAAGTTATCCGATGGTGAAGCTCTTGAATTGCTTTGTTGGAAGGCTTTCAAAACTGACAAAGTTTATCCAAATTTCGTTGATATGCTAAACCGTGCAATAACTTATGCTTCTGGCATTCCTCTGGCTCTCGAAGTCATAGGTTCAAACTTGTTTGGAAGAACAGAAGAATGGGAATCTACTTTAGATTGGTATGAAAAAATCCCCAATAATAAAGATATACAAAACGTACTCAAAATGTCCTTTGAAGCTTTGGGTGAACACGAGAAGGAGGTTTTTCTTGACATCGCATGTTTCTTCAATGGATTTGAATTAGCAGAGATCGAACATATACTCAGTGCTCATCATGGTGACAGTTTGAAACCCCACAATCCCATTCAAGCATTGGTTGAAAAATCTCTTATAAAAATTGATGAGCATGCCCATGTGAAGATACATGATTTGATACAAGAAATGGGTAGAGAAATTGTCCAACAGGAATCACGGGAACACCCTGGTAAACGCAGTAGGTTATGGTCTACTAATGATATAGTTCGTGTTTTAGAAGAAAATACGGGAACGTGTAAAATTCAAAGTATAGTTCTGGATTTCTCCAAACTTGAAAAAGTGGTACAATGGGATGGAATGGCCTTCATGAAGATGACAAACCTTAGAACACTTATTATTAGAAAGGAGTGCTTTTCCAAAGGTCCGAAAAAACTTCCAAATAGCTTGAGAGTGCTGGAATGGTGGGGATATCCGTCAGAGTCTTTACCATCCGATTTTCAGCCAGAGAAACTAGCTATATTGAAGTTACCCTACAGTTGCTTTATGTCACTTGAGTTGCATAAGTATTTGAATATGAGAGTTTTGAATTTTGACAAGTGTGAATTTATAACACGGATACCTGAGTTATCTGGTGCCCCAAATTTAAAAGAATTATCTTTTGTCTTTTGTGAGAATTTATTTGAAATTCATGAATCAGTTGGCTTCCTAGATAAACTTGAAATCTTGAACTTTGATGGTTGCAGCAAGCTTTGGACTTTTCCACCAATCAAGTTGACCTCTCTTGAAAGCATAAACCTTTCATATTGTTCAAATCTTGTGAGTTTTCCTGAAATATTTGGAAAAATGGAAAACATAACACATCTTTCTTTGGCCTACACTGCCATAAGTGAAATACCCTATTCAATTGGAAATCTTATTCGGCTTCAAAGGTTGGAGCTGCACAGCTGTGGAATGGTTCAGTTGCCAAGTAGCATTGCCATGTTGCCAGAACTTGAAGTGTTGAGCATTGGGCAATGTGAAGGGTTGCAATCTGCTAAACAGGACAGAGGTGTAGAAAAAGAGAGTTCAATGGTGTTTTCAAACGTGAAACATATTGATTTCTTGTCCTGCAATATATCAGATGAATTCATTGAAATAGGGCTTGCTTGGTTTGTCAACGTGAAAGAGTTAGACCTTTCAACAAATAATTTCACAATTCTTCCTTCATGCATCAAAGAATGTCACCTTTTGAGGAAACTTAATTTGGATTACTGCATGCATCTTCGAGAAATTGGAGGGATTCCACCCAATTTAGAGACATTATCTGCAATACGGTGCACGTCATTGAAAGATTTAGACCTCACAGTTCTTGCATCCACCAAAGAATGCTGCTTTTTGAGAGAACTTATTTTGGATGATTGCGATAGTCTTCAAGAAGTCAGAGGGATTTCACCAAACATAGAAATTTTGTCTGCAACAAACTGCAGATCCTTGACTGCCTCGTGTAGAAGAATGTTACTGAAACAGGAGTTGCATGAAGCTGGAAATAAGAGATTTTGTTTGCCTGGAACAAGGATTCCAGAATGGTTTGAGCATTGTAGCAGGGGACAGTCAATTTCTTTTTGGTTTCGTAACAAGTTCCCAGCGATATCTCTCTGTCTTGCTGGACTCATGCATAAGCACCCTATTGGATTTAAACCTATTGTGTCCATTAATGGCCGTAAAATGAAGACAGGGTTCCATACTGAATTGTTTAATTTTGAGTTCCCAGTATTGACTGATCATATACTTGCCTTTGGTGAAAGACAAGTTAAATTTGAAGATAATGTGGATGAAGTACCTTCAGAAAATTTGAAGATATTGATTTCAAATGGAACCCAACAGAACAGTTTGTTGTGCGAACTGGACTCCATGTAA | 3168 | 0.4044 | MADAGWSSYDVFVSFRGSDTRLGFVGHLYKALNQRGFRTFVDDDELRRGDKISASLVKAIEASVISVVVFSENYASSEWCLDELAQILESRRLVLPVFYYVDPSDVKHQKGIYGEALAMLRKSNTDSDKLIKWRSALHQAADLPGFHFRHGDGYEYELIGKIVDYVSKKINRPAAADRSVGLEYRMLELNWLLDASSDGARVIGICGMGGIGKTTLARAVYDSVAVQFDAPCFLHEVRETAIKHGLVHLQETLLAELVGGDKDIKLPSVRLGISIIKQRLCKKKVLVVLDDVNEPAHLNALVGRPDWFGPGSRVIVTTRDRQLLQTHGVDKIYEVEKLSDGEALELLCWKAFKTDKVYPNFVDMLNRAITYASGIPLALEVIGSNLFGRTEEWESTLDWYEKIPNNKDIQNVLKMSFEALGEHEKEVFLDIACFFNGFELAEIEHILSAHHGDSLKPHNPIQALVEKSLIKIDEHAHVKIHDLIQEMGREIVQQESREHPGKRSRLWSTNDIVRVLEENTGTCKIQSIVLDFSKLEKVVQWDGMAFMKMTNLRTLIIRKECFSKGPKKLPNSLRVLEWWGYPSESLPSDFQPEKLAILKLPYSCFMSLELHKYLNMRVLNFDKCEFITRIPELSGAPNLKELSFVFCENLFEIHESVGFLDKLEILNFDGCSKLWTFPPIKLTSLESINLSYCSNLVSFPEIFGKMENITHLSLAYTAISEIPYSIGNLIRLQRLELHSCGMVQLPSSIAMLPELEVLSIGQCEGLQSAKQDRGVEKESSMVFSNVKHIDFLSCNISDEFIEIGLAWFVNVKELDLSTNNFTILPSCIKECHLLRKLNLDYCMHLREIGGIPPNLETLSAIRCTSLKDLDLTVLASTKECCFLRELILDDCDSLQEVRGISPNIEILSATNCRSLTASCRRMLLKQELHEAGNKRFCLPGTRIPEWFEHCSRGQSISFWFRNKFPAISLCLAGLMHKHPIGFKPIVSINGRKMKTGFHTELFNFEFPVLTDHILAFGERQVKFEDNVDEVPSENLKILISNGTQQNSLLCELDSM | 1055 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo10g02888 | 1055 | Gene3D | - | 6 | 170 | IPR035897 | - | |
Pumo10g02888 | 1055 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 431 | IPR027417 | - | |
Pumo10g02888 | 1055 | Gene3D | - | 171 | 332 | IPR027417 | - | |
Pumo10g02888 | 1055 | Pfam | TIR domain | 9 | 169 | IPR000157 | GO:0007165 | |
Pumo10g02888 | 1055 | SUPERFAMILY | "Winged helix" DNA-binding domain | 408 | 517 | IPR036390 | - | |
Pumo10g02888 | 1055 | Gene3D | Ribonuclease Inhibitor | 454 | 698 | IPR032675 | - | |
Pumo10g02888 | 1055 | SUPERFAMILY | L domain-like | 539 | 892 | - | - | |
Pumo10g02888 | 1055 | PRINTS | Disease resistance protein signature | 372 | 386 | - | - | |
Pumo10g02888 | 1055 | PRINTS | Disease resistance protein signature | 279 | 293 | - | - | |
Pumo10g02888 | 1055 | PRINTS | Disease resistance protein signature | 202 | 217 | - | - | |
Pumo10g02888 | 1055 | PRINTS | Disease resistance protein signature | 680 | 696 | - | - | |
Pumo10g02888 | 1055 | ProSiteProfiles | TIR domain profile. | 7 | 170 | IPR000157 | GO:0007165 | |
Pumo10g02888 | 1055 | SMART | till_3 | 8 | 143 | IPR000157 | GO:0007165 | |
Pumo10g02888 | 1055 | Pfam | NB-ARC domain | 190 | 399 | IPR002182 | GO:0043531 | |
Pumo10g02888 | 1055 | Gene3D | Ribonuclease Inhibitor | 699 | 923 | IPR032675 | - | |
Pumo10g02888 | 1055 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 6 | 172 | - | - | |
Pumo10g02888 | 1055 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 9 | 784 | IPR044974 | GO:0006952 | |
Pumo10g02888 | 1055 | Gene3D | - | 337 | 421 | IPR042197 | - | |
Pumo10g02888 | 1055 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 8 | 146 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo10g02888 | Pumo-Chr10 | 57975391 | 57979632 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo10g02888 | 9 | 767 | WRKY Transcription Factor Family | AT4G12020 | 32.661 | 3.32e-92 | 322 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo10g02888 | - | - | gmx:100817027 | 1489.17 |