Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02886 ATGCCAATCTTGAGTCGCTTGATTGAGCCAAAAGCCTTCACAAATGATGTTTTGCTCATCTGCGTCCAAGAAACCCACGCCGGTTTTACAGGCCATCTCCTTAATGCATTCCAACAGCGGGGATTCCGCACCATTGTTCGCGTGGATCATGGGAAGCTTGACAGAGAGGCAATTGAAGCATCCATGGTTGTCACTATTAACTTATCCAAGGACTTTCTAGTTTCTCCGCCTCACTTGGATAACCTTTCCGAGACCGTTGATGCGTTCAGTAAGGGGAGGATGGGTCGAATGCTTCTGAGTGTTTTCCACCACGTGGAACCCTCCGATGTGCGACATCGGACGTTGACTGATTATAAGAAGTCTGTCGAGCCTGAGAGGTTGGACAAATGGCGTAACGCTCTAAACGCTCTAACGACGACGCACTCCTTCGGCTGTCATTTCCAACGGCACGGTGATACACATGAATACGAGTGTATTGAGAACATTCTTCGGAAGGTCTGTGAACACTTTGCTTCTAAGATTGGACTAAATCCTCGGGTGAAGGAAGTGATCCAGCTTTTGTATTCCAAATCTGGTGATGGAGTCCACGTGGTTGGGATATGTGGAGATCCTGGAATAGGAAAAAAAACTATAGCTCGGGGAGTCTATGACTTAATTGCCCATGAAGGATTTGATAACTGTTGCTTTCTTCACCACGTGGGAGAAAATTTAAGGGAGCATGGATTAGTACATCTTCCACAGATGCTTCTGTCTGAAATGGTTGGAAACTTGGTTGACACGGTTGGCCACAGCAATATCCAGTTTGGAAATTTCGAGGAAGGAATGTCAGTAATAAAGCATACACTCAACCAAAAGAAGGTTCTTTTAATTTTGGATGGCATTAACCATTCCGATTTGTTGAAAGCTGTTGTCGAGCTTACTGATTGTCTTGGTTCTGGAAGCCGGGTCATCATTACAGCTCAAGACAAATGTTTGCTTGAAAGTCATGGAATTGAAAGAATATATGAAGTAAAGAGGTTAGATAGTAGATTGGGTCTTCAATTGCTTCGTCTAAAAGTTTTTAGTTCCATGAAAATTAGTGTCAGGTACATCAACATTATAGACCGTGCGGAAACTTGTGCTTCTGGCAATCCATTGGCTCTGGAAGTAATTGGTTCCAATTTGTGTGGAAAAACAACAGAGGAATGCAAGTCTGTGTTAGATCAATATGAAAGACTTCCAAATACAGACTTGATACAGAACTTGGTTAGAGAAAACAATCGGAAACGATTGTCCAAGGATATTTTAGAAGAAAATATGGAGTATAACAGGCGAGATGCTCAAGCTGCTTCAAATGATAGAAGCAGGATTTGGGATCCCATGGAATTGGAATTTCAACTCTGCTCTTCTACCCTCTTGGATATAGCTTTGTGA 1413 0.4282 MPILSRLIEPKAFTNDVLLICVQETHAGFTGHLLNAFQQRGFRTIVRVDHGKLDREAIEASMVVTINLSKDFLVSPPHLDNLSETVDAFSKGRMGRMLLSVFHHVEPSDVRHRTLTDYKKSVEPERLDKWRNALNALTTTHSFGCHFQRHGDTHEYECIENILRKVCEHFASKIGLNPRVKEVIQLLYSKSGDGVHVVGICGDPGIGKKTIARGVYDLIAHEGFDNCCFLHHVGENLREHGLVHLPQMLLSEMVGNLVDTVGHSNIQFGNFEEGMSVIKHTLNQKKVLLILDGINHSDLLKAVVELTDCLGSGSRVIITAQDKCLLESHGIERIYEVKRLDSRLGLQLLRLKVFSSMKISVRYINIIDRAETCASGNPLALEVIGSNLCGKTTEECKSVLDQYERLPNTDLIQNLVRENNRKRLSKDILEENMEYNRRDAQAASNDRSRIWDPMELEFQLCSSTLLDIAL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02886 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 414 IPR027417 -
Pumo10g02886 470 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 429 IPR044974 GO:0006952
Pumo10g02886 470 PRINTS Disease resistance protein signature 197 212 - -
Pumo10g02886 470 PRINTS Disease resistance protein signature 374 388 - -
Pumo10g02886 470 PRINTS Disease resistance protein signature 281 295 - -
Pumo10g02886 470 Gene3D - 167 334 IPR027417 -
Pumo10g02886 470 Pfam TIR domain 26 150 IPR000157 GO:0007165
Pumo10g02886 470 Gene3D - 16 166 IPR035897 -
Pumo10g02886 470 Pfam NB-ARC domain 180 405 IPR002182 GO:0043531
Pumo10g02886 470 Coils Coil 412 432 - -
Pumo10g02886 470 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 136 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02886 Pumo-Chr10 57942406 57951175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02886 173 391 WRKY Transcription Factor Family AT5G45050 29.680 4.78e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02886 - - mtr:11444571 311.997