Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02878 ATGTATCATAATCTTGGTGTGCCGTGGGAAGATGAGTCATGGATAGATATATCTTTAGACCCGTTGTGGGAGATATATAGTCTAAGAAGTAACTCTTGGAGAAAGCTCGACGTCGAAATGCCTTATTCTTTAAGTGATGTGGCAGGTTATCAAGTGTACATGGATGGAATGTGTCATTGGTGGGGCAATTGTGATAAAGAAACAGAAGAAGAAGAATGTTTGGTATCATTTGACATGAGCAATGAGGTGTTCTTTACAACACCCATGCCCTCGGACACGGATGACATTAAAGCATTTAATTCACCAGACGGTCCAACTTATATGGATAGATACTTGGTGGTGCTAAACGGGTCTATTGCTTATATCTCATATTGTACAGAGACAACTACTTTTCACGTATCAATTTTGGGTGAATTCGGTGTTAAAGAGTCATGGACTAAACTCTTCATTGTTGGGCCTTTACCTTAG 468 0.3974 MYHNLGVPWEDESWIDISLDPLWEIYSLRSNSWRKLDVEMPYSLSDVAGYQVYMDGMCHWWGNCDKETEEEECLVSFDMSNEVFFTTPMPSDTDDIKAFNSPDGPTYMDRYLVVLNGSIAYISYCTETTTFHVSILGEFGVKESWTKLFIVGPLP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02878 155 NCBIfam F-box protein interaction domain 23 151 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02878 Pumo-Chr10 57728182 57728649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02878 20 91 Carbohydrate Esterase AT1G25141 30.556 4.64e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02878 - - tpra:123901480 176.022