Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02863 ATGGAGGAGGAGAAAGAAGAAACAACCAACCAAGACCACAACAACAACAACAACGACCCTCCTTCTCTCCTCCCTATTAAGGAAGAGTGTAGTAGAGTGAGAAAACCCTTTAGTGGGAGTGGTGATAGAGTGAAGAGAGATGAGTGGAGTGAAGGGGCAGTGTCAACCCTCCTTGAGGCCTATGAGGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCGCGGCACGTGTCGTCACGTGCCAACTGCACCAAGTCACCAAAAACTTCAACACAGTGTAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAATCAGCAACCGCAGATCATGCATCATCTTGGCCTCTATATTCGAGGCTTGATCTTCTTCTAAGGGGAACTGGGCCCGTGTTGTCGTCGCCGCCGGTGGCGGCGGTGGTGGCTGCGGCGGCGCCGTCGTTGTCGCCGGTGGAGCCGTCACAACCGCCGCCCCCGGCGGCTCCTTCAGGGCCACTTGCAAATGCGCAAAACTCAGATGGATCCAATGGGGTTGATGATAAGCTTGCTAAGGAAGATGGGTTAGCAACAAAATCATCTGATCATGTATCTAGCAAGAATCCATTGGACACAGATAGCAGCACCCCTGCACTAATTTATAGCAAGAAGGATGAGTTAAGATGTAACAAGAGGAAGAAGAAAATAATTGACAACACAGGGCGAAGAAGGAAAGAATATGTGGAGATAGCAGAAAGTTTAAGATGGCTAGCAGAAGCTATGATAAGGTCAGAGCAAGCAAGAATGGACACAATGAAGGAGATAGAGAGGATGAGAGCTGAAGCTGAGGCGAAGAGAGGGGAAATGGACCTTAAGAGAACTGAAATAATTGCCAATACACAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAATAAAGGTGTTGATTCATCTCTAAGAATTGGAAGAAGTTAA 984 0.4817 MEEEKEETTNQDHNNNNNDPPSLLPIKEECSRVRKPFSGSGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCTKSPKTSTQCKNKVESMKKRYRSESATADHASSWPLYSRLDLLLRGTGPVLSSPPVAAVVAAAAPSLSPVEPSQPPPPAAPSGPLANAQNSDGSNGVDDKLAKEDGLATKSSDHVSSKNPLDTDSSTPALIYSKKDELRCNKRKKKIIDNTGRRRKEYVEIAESLRWLAEAMIRSEQARMDTMKEIERMRAEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02863 327 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 19 313 IPR044823 -
Pumo10g02863 327 MobiDBLite consensus disorder prediction 28 46 - -
Pumo10g02863 327 Pfam Myb/SANT-like DNA-binding domain 46 133 IPR044822 -
Pumo10g02863 327 MobiDBLite consensus disorder prediction 188 202 - -
Pumo10g02863 327 Gene3D - 49 114 - -
Pumo10g02863 327 MobiDBLite consensus disorder prediction 160 174 - -
Pumo10g02863 327 MobiDBLite consensus disorder prediction 203 219 - -
Pumo10g02863 327 MobiDBLite consensus disorder prediction 158 219 - -
Pumo10g02863 327 Coils Coil 270 297 - -
Pumo10g02863 327 MobiDBLite consensus disorder prediction 1 46 - -
Pumo10g02863 327 FunFam Trihelix transcription factor ASIL2 49 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02863 Pumo-Chr10 57446148 57450582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02863 14 309 Trihelix Transcription Factor Family AT3G14180 24.595 9.84e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo10g02863 Myb_DNA-bind_4 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02863 - - gmx:100793978 488.034