Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02861 ATGAAAACCACAGTGCCGTGCTGTTCCGTTTGCCGAACCCACTACGACGAGGAGCAGCGGGTCCCACTCCTTCTTCAATGCGGCCACGGCTTCTGCCGGGACTGTCTTTCTAGAATGTTCTCCACCTCAACAGACACCAAGCTGACGTGTCCCCGCTGCCGCCACGTGTCACCGGTCGGAAACTCCGTCAACGCTCTCCCCAAAAACTTCCCCGTCCTCGCGCTCCTCCGCTCGCCGTCTTCTAACGCCATCAGGTCCGTTCTCGACTTCGATTTCGACTACACCGATGACGAAGAAGAAGAAGAGGATCAAGATCAACGTGATCAGAGCCACCTGAAACACGATGAAGTATTGTGGCGGAGCGGTGGTGGAGGATTGAGGCTGGTGCGGCGGATTGGAGACGGCGGGAGGGTGGGCGTGGAGACGTGGACGGCGGTGATGGGCGGTGGACGGCGGAAGGTGGCGGTGAAGAAGGTGGAGGTGGTGGAGGAGGTGGAGTGGGTGATGGAGAAGCTTGAGTTGTTGCGAAGGGGTTCGATGTGGTGTAGGAATGTGTGCGCGTTTCATGGGGCAGTGAGAGTGAGTGATGATGGTTTGTGGCTTGTCATGGATAGGTGTTATGGGTCCATTCAGTCGGAGATGCAACGCAACGAGGGAAGACTCACTTTGGAGCAAGTCCTAAGATATGGGGCAGACATTGCGCGAGGGATTGTGGAGCTTCATGCTGCAGGCATTGTTTGCATGAATATAAAACTATCCAATCTTCTTCTTGATTCAAATGGTCATGCAGTGGTGTCTGATTATGGGCTTGCTTCTATTCTGAAGAAGCATTCCTGTTGGACAGGCCAACCTGAGTGTGACTCCTCAAAGACTCACTCCTGTATGGAATGTACAGTGCTCAGCCCACATTACACAGCTCCAGAGGCTTGGGGCCAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCAGCAGAGTCTGATGCCTGGAGTTTTGGTTGTACACTGGTGGAGATGTGCACGGGTTCCGTTCCTTGGGCTGGTTTAAGTTCGGAGGAAATTTATCACGCAGTTGTCAAGGCAAAGAAACTGCCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATACCTAGTGATTTGTGGAGGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGGCCTAGTTTTAATGCAATGTTAGCAATATTTCTCCGTCATTTGCAGGGAATACCACGCAGCCTTCCTGCAAGCCCTGATAATGACTTTGTTAAAAGCTTTTCGTCAAATGTGATGGAGATGTCCCCTCTGCCTGAATTGGAAGTTTCTCAGCAAAACCCATTCCATCTTCATCAACATGTGTCTCAGGGGGATGTCAGAAGTGTTAGAGATCTTCTTGTCAAGGCTGCATCAGATTATGGCAGCAACTACCTATCTTCTCTATTGGAAGCTCAAAATGCTGATGGACAAACTGCTCTCCACTTGGCTTGTAGACGTGGCAGCACAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAGGCAAATGTTGATGTCTTGGACAAAGACGGAGATCCTCCTCTTGTTTATGCATTAGCTGCTGGATCCCCAGAATGCGTTCATGGTCTCGTCAAAAGAGGTGCTAATGTGAGGTCACAATTAAGAGATGGCTTTGGCCCATCTGTTGCTCATGTTTGTGCACATCATGGCCAACCAGATTGCATGCAAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAATGTGAATCTGTCCTGCATAGAGCAGTTGCAAAGAAGTCCACTGACTGTGCCCTTGTGATACTGGAAAATGGGGGCAGTAGATCAATGGCCATCTTGAATTCAAAGAATATGACACCACTGCACTTGTGTGTAGCAACTTGGAATGTTGCCGTTGTAAAAAGATGGGTTGAAGTTGCAACTTCTGATGAGATTGCTGAATCAATTGACATCCCGAGCCCTATGGGCACTGCTTTGTGCATGGCTGCTGCCTCTAAGAAAGATCATGAAAGTGAGGGGAGAGAATTGGTGCAAATATTGCTCGCTGCAGGAGCAGATCCATATGCTCAAGATTCACAGCGCGGGTGGACAGCTTTGCATACAGCTGTTATGACTGACGATGTTGAATTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGCAATGTGCACAATGGCATACCTCTTCACATAGCCTTAGCTAGGGGAGCTAAGTCATGTGTTGAACTACTTCTATCTATTGGGGCAGATTGTAATTTGCAGGATGATGATGGTAACACTGCTTTCCATATAGCAGCAGAAACAGCAAAAATGATACGTGAAAATCTTGATTGGCTTATTGTTATGCTTGGGAATCCTAATGCTGATGTATTAGTCAGAAACCACAGTGGCAAGACTCTACGTGATGTCTTGGAGGTCCTTCCCCGAGCATGGATATCTGAAGATCTGATGGAGGCACTCATGAAGAAAGGAGTTCGTCTCTCTCCTACAATATTTGAAGTGGGAGACTGGGTGAAGTTTAGAAAAACTTCCATAACTCCAACAAATGGGTGGGAAGGTGATCGGCAGAAGCATGTGGGCTTTGTGCAAAGAGTTCCAGACAAAGATAACCTCATTGTTTCATTTTGTTCCGGAGAGTATAGTATTTTGGCCAATGAAGTTGTAAAAGTCACTCCATTAGACAGGGGACAACGTGTGCAGCTTAAAGAGGATGTAAAAAAGCCAAGGTTTGGTTGGCCTGGGCAGTCTCGTGACAGCATTGGGACAGTACTTTGTGTTGATGATGATGGGATCATCCGAGTTGGGTTTCCTGGACAGTCCAGAGGATGGAAAGCTGACCCAGGAGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGATTGGGTTCGTATTCGTCCTTTTCTCACATCTACAAAACATGGATTAGGATCTGTGACACCAGGAAGCATCGGCATTGTATATTGTATCAGACCAGACAGTAGTCTGTTAATAGAACTGAGTTATCTTCCAACTCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGTCCCTTTTAGGATTGGTGATCGGATATGCGTGAAGCGATCTGTTGCAGAACCTAGATATGCTTGGGGAGGTGAGACACATCATAGTGTTGGAAAAATAAGAGAGATTGAGAGTGATGGTCTCTTAATAATAGATATACCAAACCGACCTGTTCCATGGCAGGCAGATCCTTCAGATATGGAGAAGGTGGAAGATTTTAAGGTGGTTGGAGATTGGGTCAGAGTTAAAGCTTCAGTGTCTGCTCCAAGATATGGGTGGGAGGATATTACAAGAGACAGTATTGGAGTAATTCATAGCTTGGAGGAGGATGGCGATATGGGTATTGCCTTTTGCTTCAGGAATAAGCTTTTTCCTTGCTCAGTCACTGATGTTGAGAAAGTTCCCCATTTTGAGGTGGGGCAAGAAATTCGTGTTATGCCATCTGTTAACCAGCCACGGCTTGGATGGTCAAACGAATCACCCTCTACTGTAGGAAAAATAGTGAGAATTGATCTGGATGGTGCTCTCAATGTGAGGGTCCCTGGTAGGCATCGCTTGTGGAAAGTTTCTCCTGGAGATGTGGAACGACTTCCAGGATTTGAAGTTGGTGATTGGGTTTGCTCAAAACCGAGCCTGGGAAGCAAATCAAGCAATGACTTGAATAGTGTTAGAAGTATAGCTGTTGTGCATAGTGTACAGGATTCTGGGTACTTGGAGTTGGCTTGCTGTTTCCGTAAATTGAAGTCATTGACTCATTATACTGAAGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGTATGTTAGGTTCAGAACCGGTTTGGTGGAACCGAGATGGGGATGGAGAGGAGCTCAGCCTGAATCTCGAGGTGTTTTAACCGGCATTCACGCTGATGGAGAAGTGAAGGTGGCATTCTTTGGTTTGCCAGGATTGTGGAGAGGAGACCCTGCAGACCTGGAAATTGAACAGATGTTTGAAGTGGGAGAGTGGGTGAGGTTGAAAGATGAAGCCAGTGAATGGAACTCAATTGGGCCAGGTAGTGTTGGTGTTGTACAAGGCATAGGGTATGAAGAAGATGAATGGAACAACAATACTTATGTTGCCTTTTGTGGAGAGCAAGAAAGGTGGGTAGGACCTAGTTCCCATCTTGAAAGAGTTCACAAACTCTTTGTTGAACACAAAGTTAGAGTAAAACATAACGTAAAGCAACCAAGATTTGGGTGGTCCGGGCACACCCATGCAAGCATTGGAACGATACAAGCCATTGATGCCGATGGAAAGCTCCGAATATACACGCCAGAGGGATCAAGAGCATGGATGTTGGACCCATCAGAAGTGGAGGTGGTGGAAGAGAAGAGGCTCTGTATTGGAGACTGGGTCAATGTTAAAGCATCAGTTTCAACCCCAAACTACCATTGGGGAGAGGTGACTCATTCAAGCATAGGTGTGGTGTATCGGATGGAGGATGAAAATCTTTGGGTGGCTTTCTGTTTTATGGAGAGGCTATGGCTTTGTAAGGCGTGGGAAATGGAACAGGTTAGGCCATTTAGAGTGGGAGACAATGTTAGGATCAAAGATGGATTGGTGACCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGTAAGGGAAGGGTGGTAGGGGTAGATGCAAATGGCAAGGTAAGAATAAAGTTCCAGTGGAGGGAAGGGAGGCCTTGGGTAGGAGACCCTGCTGATGTTGTCCTTGATGAAAATTGA 4821 0.4698 MKTTVPCCSVCRTHYDEEQRVPLLLQCGHGFCRDCLSRMFSTSTDTKLTCPRCRHVSPVGNSVNALPKNFPVLALLRSPSSNAIRSVLDFDFDYTDDEEEEEDQDQRDQSHLKHDEVLWRSGGGGLRLVRRIGDGGRVGVETWTAVMGGGRRKVAVKKVEVVEEVEWVMEKLELLRRGSMWCRNVCAFHGAVRVSDDGLWLVMDRCYGSIQSEMQRNEGRLTLEQVLRYGADIARGIVELHAAGIVCMNIKLSNLLLDSNGHAVVSDYGLASILKKHSCWTGQPECDSSKTHSCMECTVLSPHYTAPEAWGQPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWAGLSSEEIYHAVVKAKKLPPQYASVVGGGIPSDLWRMIGECLQFKPSKRPSFNAMLAIFLRHLQGIPRSLPASPDNDFVKSFSSNVMEMSPLPELEVSQQNPFHLHQHVSQGDVRSVRDLLVKAASDYGSNYLSSLLEAQNADGQTALHLACRRGSTELVEAILEYEEANVDVLDKDGDPPLVYALAAGSPECVHGLVKRGANVRSQLRDGFGPSVAHVCAHHGQPDCMQELLLAGADPNAVDDECESVLHRAVAKKSTDCALVILENGGSRSMAILNSKNMTPLHLCVATWNVAVVKRWVEVATSDEIAESIDIPSPMGTALCMAAASKKDHESEGRELVQILLAAGADPYAQDSQRGWTALHTAVMTDDVELVKVILAAGVDVNIRNVHNGIPLHIALARGAKSCVELLLSIGADCNLQDDDGNTAFHIAAETAKMIRENLDWLIVMLGNPNADVLVRNHSGKTLRDVLEVLPRAWISEDLMEALMKKGVRLSPTIFEVGDWVKFRKTSITPTNGWEGDRQKHVGFVQRVPDKDNLIVSFCSGEYSILANEVVKVTPLDRGQRVQLKEDVKKPRFGWPGQSRDSIGTVLCVDDDGIIRVGFPGQSRGWKADPGEMERVEEFKVGDWVRIRPFLTSTKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPTPWHCEPEEVEHVVPFRIGDRICVKRSVAEPRYAWGGETHHSVGKIREIESDGLLIIDIPNRPVPWQADPSDMEKVEDFKVVGDWVRVKASVSAPRYGWEDITRDSIGVIHSLEEDGDMGIAFCFRNKLFPCSVTDVEKVPHFEVGQEIRVMPSVNQPRLGWSNESPSTVGKIVRIDLDGALNVRVPGRHRLWKVSPGDVERLPGFEVGDWVCSKPSLGSKSSNDLNSVRSIAVVHSVQDSGYLELACCFRKLKSLTHYTEVEKVPCFKVGQYVRFRTGLVEPRWGWRGAQPESRGVLTGIHADGEVKVAFFGLPGLWRGDPADLEIEQMFEVGEWVRLKDEASEWNSIGPGSVGVVQGIGYEEDEWNNNTYVAFCGEQERWVGPSSHLERVHKLFVEHKVRVKHNVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPEGSRAWMLDPSEVEVVEEKRLCIGDWVNVKASVSTPNYHWGEVTHSSIGVVYRMEDENLWVAFCFMERLWLCKAWEMEQVRPFRVGDNVRIKDGLVTPRWGWGMETHASKGRVVGVDANGKVRIKFQWREGRPWVGDPADVVLDEN 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat region circular profile. 742 774 - -
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat profile. 709 741 IPR002110 GO:0005515
Pumo10g02861 1606 SUPERFAMILY Ankyrin repeat 489 786 IPR036770 -
Pumo10g02861 1606 FunFam E3 ubiquitin-protein ligase KEG 434 664 - -
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat region circular profile. 494 516 - -
Pumo10g02861 1606 Pfam Ankyrin repeats (many copies) 566 613 IPR002110 GO:0005515
Pumo10g02861 1606 SUPERFAMILY Protein kinase-like (PK-like) 124 414 IPR011009 -
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat profile. 494 527 IPR002110 GO:0005515
Pumo10g02861 1606 Gene3D - 562 662 IPR036770 -
Pumo10g02861 1606 SMART ANK_2a 775 810 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 669 704 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 563 592 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 631 662 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 742 771 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 709 738 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 494 524 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 528 557 IPR002110 GO:0005515
Pumo10g02861 1606 SMART ANK_2a 596 625 IPR002110 GO:0005515
Pumo10g02861 1606 Pfam Zinc finger, C3HC4 type (RING finger) 8 53 IPR018957 GO:0046872
Pumo10g02861 1606 SMART ring_2 8 53 IPR001841 -
Pumo10g02861 1606 Gene3D Transferase(Phosphotransferase) domain 1 99 412 - -
Pumo10g02861 1606 ProSiteProfiles Protein kinase domain profile. 126 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02861 1606 Pfam Mind bomb SH3 repeat domain 850 968 IPR040847 -
Pumo10g02861 1606 Pfam Mind bomb SH3 repeat domain 1482 1601 IPR040847 -
Pumo10g02861 1606 Pfam Mind bomb SH3 repeat domain 1352 1473 IPR040847 -
Pumo10g02861 1606 Pfam Mind bomb SH3 repeat domain 974 1094 IPR040847 -
Pumo10g02861 1606 Pfam Mind bomb SH3 repeat domain 1103 1221 IPR040847 -
Pumo10g02861 1606 Pfam Mind bomb SH3 repeat domain 1227 1346 IPR040847 -
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat profile. 742 774 IPR002110 GO:0005515
Pumo10g02861 1606 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 5 1605 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pumo10g02861 1606 SUPERFAMILY RING/U-box 7 62 - -
Pumo10g02861 1606 Gene3D - 663 846 IPR036770 -
Pumo10g02861 1606 PRINTS Ankyrin repeat signature 758 772 IPR002110 GO:0005515
Pumo10g02861 1606 PRINTS Ankyrin repeat signature 495 510 IPR002110 GO:0005515
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat profile. 528 560 IPR002110 GO:0005515
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat region circular profile. 709 740 - -
Pumo10g02861 1606 FunFam E3 ubiquitin-protein ligase KEG 707 841 - -
Pumo10g02861 1606 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 85 IPR013083 -
Pumo10g02861 1606 ProSitePatterns Zinc finger RING-type signature. 27 36 IPR017907 -
Pumo10g02861 1606 ProSiteProfiles Zinc finger RING-type profile. 8 54 IPR001841 -
Pumo10g02861 1606 Pfam Ankyrin repeats (3 copies) 688 773 IPR002110 GO:0005515
Pumo10g02861 1606 Pfam Ankyrin repeats (3 copies) 456 556 IPR002110 GO:0005515
Pumo10g02861 1606 CDD RING-HC_KEG-like 5 61 - -
Pumo10g02861 1606 Pfam Protein kinase domain 129 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02861 1606 ProSiteProfiles Ankyrin repeat profile. 563 595 IPR002110 GO:0005515
Pumo10g02861 1606 Gene3D - 449 561 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02861 Pumo-Chr10 57377314 57391958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02861 153 407 MAP Kinase Kinase Kinase AT4G18950 27.376 4.30e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pumo10g02861 Pkinase 5.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02861 K16279 - gmx:100783181 2954.08