Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02856 ATGGAAACCTTCAGTCACCCTCACCCCGTTGAGCCAAAAACCTTCCGAAATGATGTGTTGATCATCGGCGCCGAAGACACCCACTACCGTGTTGCGGGTACTCTCCTCAATGCTCTCCGTCTGCGTGGTTTCCTTACAAGCTTAGCCAGGGCTGGTCATGAGCCAGGAAGAAAGGCAATTGAAGAATCCATGATTGCCATTCCTATCTTATCCAAGGGTTATCTATCTTCTCATGATTACTTGGAGGAACTTGCCGAGGTGGTTGCTGAGAAGAGGATGGGTCAACCGTTTCTGCCCTTTCTTTACAACGTGGAACCCGCATATGTGCGAGATCAGATATGTGGTGTGGAGTCAGAAAAGTTTGAGAAATGGAATGAGGTTCTGACTAAAGTGACTGATTTGACTGACTTTCATTTCAGGGACGGGGTTACGTACGAATACGAATGGATTGAGAAGATCGCTCATGTGGTCTCTGAACACGCTGCTTCCATAATTGGACTAATTCCTCGGGTGAAGGAAGTGATGCCGCTCTTGTTTTCGGAATTGGGCTATAGAGTCAACGTGGTTGGGATATGTGGAGTTCCTGGAATAGGAAAGAAAACAATAGCAAGTGGAGTTTATGATGACTTAATTGCCGGTGAAGGATTTGAGTATCATTGCCTTCTTGATGATGTGGGAGAAAAATTAAGGGAACATGGAGCAGAACATCTCCAACATATGCTTCTGTCCAAAATCTACATGAGGTTTGGAAAATTGGCTGTCGGGGACAACTACTATAACAAGTTAAGAATCGAGGAAGGAATGTCAGCAATAAAGAGTACATTTGAACAAAAGAAGGTTCTTACAGTTTTCAATGGCATTAACTGTTCAGATTCGCTGATAGCTGTTCTTGGGCTTACTCCTTTCTTTGGTCCTGGAAGTCAAGTCCTCGTTACATCTCAAGATAAATATTTGCTTGAGAGTTTTGGAATTGGAAGAATATATGAAGTAAATGGGTTTGATAAGACAACGGGTTGTCAATTGCTTTGCCTAGAGGCTTTCGATTCCATGTATATGAGTCTCGAATACATTGACATTATAAGCCGTGCTGCAACTTGTGCTTCTGGCAATCCATTTGCTTTGAAAGTAATTGGTTCCAATTTTCGTGGAAAAACAATAGCGGAATGCAAGATTGCATTAGATGAATATGAAAAAATTCCAAAAGCAGACTTGATACAGAGCATGATTGGAGAAAACAATCGGATCCCAAAATCCGAGGATATTTTAGAAGAAAATATGGAGTATGCCATGCCAGATGTCGAACCAGCCTCAGATGATGGAAGCCGGATGTGGAATTTTCAAGGATTCTCTACCGTCTTGTCCAAGGTGTTCTAA 1374 0.425 METFSHPHPVEPKTFRNDVLIIGAEDTHYRVAGTLLNALRLRGFLTSLARAGHEPGRKAIEESMIAIPILSKGYLSSHDYLEELAEVVAEKRMGQPFLPFLYNVEPAYVRDQICGVESEKFEKWNEVLTKVTDLTDFHFRDGVTYEYEWIEKIAHVVSEHAASIIGLIPRVKEVMPLLFSELGYRVNVVGICGVPGIGKKTIASGVYDDLIAGEGFEYHCLLDDVGEKLREHGAEHLQHMLLSKIYMRFGKLAVGDNYYNKLRIEEGMSAIKSTFEQKKVLTVFNGINCSDSLIAVLGLTPFFGPGSQVLVTSQDKYLLESFGIGRIYEVNGFDKTTGCQLLCLEAFDSMYMSLEYIDIISRAATCASGNPFALKVIGSNFRGKTIAECKIALDEYEKIPKADLIQSMIGENNRIPKSEDILEENMEYAMPDVEPASDDGSRMWNFQGFSTVLSKVF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02856 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 406 IPR027417 -
Pumo10g02856 457 Gene3D - 18 157 IPR035897 -
Pumo10g02856 457 PRINTS Disease resistance protein signature 274 288 - -
Pumo10g02856 457 PRINTS Disease resistance protein signature 188 203 - -
Pumo10g02856 457 PRINTS Disease resistance protein signature 367 381 - -
Pumo10g02856 457 Gene3D - 158 324 IPR027417 -
Pumo10g02856 457 Pfam NB-ARC domain 171 388 IPR002182 GO:0043531
Pumo10g02856 457 Pfam TIR domain 58 157 IPR000157 GO:0007165
Pumo10g02856 457 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 404 IPR044974 GO:0006952
Pumo10g02856 457 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 135 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02856 Pumo-Chr10 57183014 57192016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02856 165 408 WRKY Transcription Factor Family AT5G45050 27.126 8.86e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02856 - - gmx:100781554 431.024