Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02854 ATGAAAACCATAGTGCCGTGCTGTTCCGTTTGCCGAACCCACTACGACGAGGAGCAGCGGGTCCCACTCCTTCTCCAATGCGGCCAAGGCTTCTGCCGGGACTGTCTTTCTAGAATGTTCTCCGCCTCAACGGACACCAAGCTGACTTGTCCCCGCTGCCGCCACGTGTCACCCGTCGGAAACTCCGTCAACGCTCTCCCCAAAAACTTCCCCGTCCTCGCGCTCATCCGCTCGCCGTCTTCTAACGCCGTCAGTTTCAAATATGCGGCTGTCGCTTACATGCTCCACGATGAAGTGTTGTGGCGGAGCGGTGGTGGAGGATTGAGGCTGGTGCGGCGGATTGGGGACGGCGGGAGGGTGGGCGTGGAGACGTGGACGGCGGTGATGGGCGGTGGAGGGCGGAAGGTGGCGGTGAAGAAGGTGGAGGTGGTGGAGGAGGTGGAGTTGGTGATGGAGAAGTTTGAGTCGTTGCGAAGGGGTTCAATGTGGTGTAGGAATGTGTGCGCGTTTCATGGGGCAGTGAGAGTGGGTGATGATGGTTTGTGGCTTGTCATGGATCGGTGTTATGGGTCCATTCAGTCGGAGATGCAACGCAACGAGGGAAGACTCACTTTGGAGCAAGTCCTAAGATATGGGGCAGACATTGCACGAGGAATTGTCGAGCTTCATGCTGCAGGCATTGTTTGCATGAATATAAAGCCATCCAATCTTCTTCTTGATTCAAATGGTCATGCAGTGGTGTCTGATTATGGGCTTGCTTCTATTCTGAAGAAGCATTCCTGTTGGAAGGGCCAACCTGAGTGTGACTCCTCAAAGACTCACTCCTGTATGGAATGTACAGTGCTCAGCCCACATTACACAGCTCCAGAGGCTTGGGGCCAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCTGATGCCTGGAGTTTTGGTTGTACACTGGTGGAGATGTGCACGGGTTCTGTTCCTTGGGCTGGTTTAAGTTCGGAGGAAATTTATCACGCAGTTGTCAAGGCAAAGAAACTGCCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATACCTAGTGATTTGTGGAGGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGGCCTAGTTTTAATGCAATGTTAGCAATATTTCTCCGTCATTTGCAGGGAATACCACGCAGCCTTCCTGCAAGCCCTGATAATAAATACAGTGACTTTGTTAAAAGCTTTTCGTCAAATGTGATGGAGATGTCCCCTCTGCCTGAATTGGAAGTTTCTCAGCAAAACCCATTCCATCTTCATCAACATGTGTCTCAGGGGGATGTCAGAAGTGTTAGAGATCTTCTTGTCAAGGCTGCATCAGATTATGGCAGCAATTACCTATCTTCTCTATTGGAAGCTCAAAATGCTGATGGACAAACTGCTCTCCACTTGGCTTGTAGACGTGGCAGCACAGAACTTGTTGAGGCAATTTTGGGGTATGAAGAGGCAAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTATGCATTAGCTGCTGGATCCCCAGAATGCGTTCATGGTCTCATCAAAAGAGGTGCTAATGTGAGGTCACAATTAAGAGATGGCTTTGGCCCATCTGTTGCTCATGTTTGTGCACATCATGGCCAACCAGATTGCATGCAAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTCCTGCATAGAGCAGTTGCAAAGAAGTCCACTGACTGTGCCCTTGTGATACTGGAAAATGGGGGCAGTAGATCAATGGCCATCTTGAATTCAAAGAATATGACACCACTGCACTTGTGTGTAGCAACTTGGAATGTTGCCGTTGTAAAAAGATGGGTTGAAGTTGCAACTTCTGATGAGATTGCTGAATCAATTGACATCCCGAGCCCTATTGGCACTGCTTTGTGCATGGCTGCTGCCTCTAAGAAAGATCATGAAAGTGAGGGGAGAGAATTGGTGCAAATATTGCTCGCTGCAGGAGCAGATCCATATGCTCAAGATTCACAACGCGGGTGGACAGCTTTGCATACAGCTGTTATGACTGACGATGTTGAATTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGCAATGTGCACAATGGCATACCTCTTCACATAGCCTTAGCTAGGGGAGCTAAGTCATGTGTTGAACTACTTCTATCTATTGGAGCAGATTGTAATTTGCAGGATGATGATGGTAACACTGCTTTCCATATAGCAGCAGAAACAGCAAAAATGATACGTGAAAATCTTGATTGGCTTATTGTTATGCTTGGGAATCCTAATGCTGATGTATTAGTCAGAAACCACAGTGGCAAGACTCTAGGTGATGTGTTGGAGGTCCTTCCCCGAGCATGGATATCTGAAGATCTGATGGAGGCACTCATGAAGAAAGGAGTTCGTCTCTCTCCTACAATTGATCGGCAGAAGCAGGTGGGCTTTGTGCAAAGAGTTCCAGACAAAGATAATCTCATTGTTTCATTTTGTTCCGGAGAGTATAGTATTTTGGCCAATGAAGTTGTAAAAGTCACTCCATTAGACAGGGGACAACATGTGCAGCTTAAAGAGGATGTAAAAAAGCCAAGGTTTGGTTGGCCTGGGCAGTCTCGTGACAGCATTGGGACAGTACTATGTGTTGATGATGATGGGATCATCCGAGTTGGGTTTCCTGGACAGTCCAGAGGATGGAAAGCTGACCCAGGAGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGATTGGGTTCGTATTCGTCCTTTTCTCACATCTACAAAATATGGATTAGGATCTGTGACACCAGGAAGCATCGGCATTGTATATTGTATCAGACCAGACAGTAGTCTGTTAATAGAACTGAGTTATCTTCCAACTCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGTCCCTTTTAGGATTGGTGACTGGATATGCATGAAGCGATCTGTTGCAGAACCTAGATATGCTTGGGGAGGTGAGACACATCATAGTGTTGGAAAAATAAGAGAGATTGAGAATGATGGTCTCTTAATAATAGATATACCAAACCTACCTGTTCCATGGCAGGCAGATCCTTCAGATATGGAGAAGGTGGAAGATTTTACGGTGGTTGGAGATTGGGTCAGATTTAAAGCTTCAGTGTCTGCTCCAAGATATGGGTGGGAGGATATTACAAGAAACAGTATTGGAGTAATTCATAGCATGGAGGAGGATGGCGATGTGGGTATTGCCTTTTGCTTTAGGAATAAGCTTTTTCCTTGCTCAGTCACTGATGTTGAGAAAGTTCCCCATTTTGAGGTGGGGCAAGAAATTTGTGTGATGCCATCTGTTAACCAGCCACTGCTTGGATGGTCAAACGATTCACCCTCTACTATTGGAAAAATAGCGAGAATTGATCTGGATGGTGCTTTCTCAATGGGAGAGGGTTTTGAATTTTATCCCTCCCCCAGGTTGCTTAGGCATTCGCCAAAAAGTGGTGAAACAATATTAGAAAAACTTTTCACCTATAAAAAGGTGAGGGTCCCTGGTAGGCATCGCTTGTGGAAAGTTTCTCTTGGAGATGTGGAACGACTTCCAGGATTTGAAGTTGATGATTGGGTTTGCTCAAAACCGAGCCTGGGAAGCAAGTCAAGCAATGACTTGAATAGTGTTAGAAGTATAGCTGTTGTTCATAGTGTACAGGATTCTGGGTACTTGGAGTTGGCTTGCTGTTTCTGTAAATTGAAGTCATTGACTCATTATACAGAAGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAATATGTTAGGTTCAGAACCGGTTTAGTGGAACCAAGGTGGGGATGGAGAGGAGCTCGGCCTGAATCTCGAGGCGTTTTAACCGGCATTCACGCTGATGGAGAAGTGAAGGTGGCATTCTTTGGTTTGCCAGGATTGTGGAGAGGAGACCCTGCAGACCTGGAAATTGAACAGCTGTTTGAAGTGGGAGAGTGGGTGAGGTTGAAAGATGATGCCAATGAATGGAACTCAATTGGGCCAGATAGTGTTGGTGTTGTACAAGGCATAGGGTGGGTAGGACCTAGTTCCCATCTTGAAAGAGTTCACAAACTCTTTGTTGAACAGAAAGTTAGAGTAAAACTTAACGTTAAGCAACCAAGATTTGGGTGGTCCGGACACACCCATGCAAGCATTGGAACGATACAAGCCATTGATGCCGATGGAAAGCTCCGAATATACATGCCAGCAGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTGGAGGTGGTGGAAGAGAAGGGGCTCTGCATTGGAGACTGGGTTAAGGTTAAAGCATCAGTTTCAACCCCAACCTACCATTGGGGAGAGGTGACTCATTCAAGCATAGGAGTGGTGCATCGGATGGAAGATGAGAATCTGTGGGTGGCTTTCTGTTTTATGGAGAAGCTATGGCTTTATGAGGCATGGGAAATGGAACAGGTTAGGCCATTTAGAGTGGGAGACAATGTTAGGATCAAAGATGGATTGGTGACCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGTAAGGGAAGGGTGGTAGGGGTAGATGCAAATGGCAAGGTAAGAATAAAGTTCCAATGGAGGGAAGGGAGGCCCTGGGTAGGAGACCCTGCTGATGTTGTCCTTGATGAAAATTGA 4749 0.4664 MKTIVPCCSVCRTHYDEEQRVPLLLQCGQGFCRDCLSRMFSASTDTKLTCPRCRHVSPVGNSVNALPKNFPVLALIRSPSSNAVSFKYAAVAYMLHDEVLWRSGGGGLRLVRRIGDGGRVGVETWTAVMGGGGRKVAVKKVEVVEEVELVMEKFESLRRGSMWCRNVCAFHGAVRVGDDGLWLVMDRCYGSIQSEMQRNEGRLTLEQVLRYGADIARGIVELHAAGIVCMNIKPSNLLLDSNGHAVVSDYGLASILKKHSCWKGQPECDSSKTHSCMECTVLSPHYTAPEAWGQPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWAGLSSEEIYHAVVKAKKLPPQYASVVGGGIPSDLWRMIGECLQFKPSKRPSFNAMLAIFLRHLQGIPRSLPASPDNKYSDFVKSFSSNVMEMSPLPELEVSQQNPFHLHQHVSQGDVRSVRDLLVKAASDYGSNYLSSLLEAQNADGQTALHLACRRGSTELVEAILGYEEANVDVLDKDGDPPLVYALAAGSPECVHGLIKRGANVRSQLRDGFGPSVAHVCAHHGQPDCMQELLLAGADPNAVDDEGESVLHRAVAKKSTDCALVILENGGSRSMAILNSKNMTPLHLCVATWNVAVVKRWVEVATSDEIAESIDIPSPIGTALCMAAASKKDHESEGRELVQILLAAGADPYAQDSQRGWTALHTAVMTDDVELVKVILAAGVDVNIRNVHNGIPLHIALARGAKSCVELLLSIGADCNLQDDDGNTAFHIAAETAKMIRENLDWLIVMLGNPNADVLVRNHSGKTLGDVLEVLPRAWISEDLMEALMKKGVRLSPTIDRQKQVGFVQRVPDKDNLIVSFCSGEYSILANEVVKVTPLDRGQHVQLKEDVKKPRFGWPGQSRDSIGTVLCVDDDGIIRVGFPGQSRGWKADPGEMERVEEFKVGDWVRIRPFLTSTKYGLGSVTPGSIGIVYCIRPDSSLLIELSYLPTPWHCEPEEVEHVVPFRIGDWICMKRSVAEPRYAWGGETHHSVGKIREIENDGLLIIDIPNLPVPWQADPSDMEKVEDFTVVGDWVRFKASVSAPRYGWEDITRNSIGVIHSMEEDGDVGIAFCFRNKLFPCSVTDVEKVPHFEVGQEICVMPSVNQPLLGWSNDSPSTIGKIARIDLDGAFSMGEGFEFYPSPRLLRHSPKSGETILEKLFTYKKVRVPGRHRLWKVSLGDVERLPGFEVDDWVCSKPSLGSKSSNDLNSVRSIAVVHSVQDSGYLELACCFCKLKSLTHYTEVEKVPCFKVGQYVRFRTGLVEPRWGWRGARPESRGVLTGIHADGEVKVAFFGLPGLWRGDPADLEIEQLFEVGEWVRLKDDANEWNSIGPDSVGVVQGIGWVGPSSHLERVHKLFVEQKVRVKLNVKQPRFGWSGHTHASIGTIQAIDADGKLRIYMPAGSKAWMLDPSEVEVVEEKGLCIGDWVKVKASVSTPTYHWGEVTHSSIGVVHRMEDENLWVAFCFMEKLWLYEAWEMEQVRPFRVGDNVRIKDGLVTPRWGWGMETHASKGRVVGVDANGKVRIKFQWREGRPWVGDPADVVLDEN 1582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat region circular profile. 694 725 - -
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat profile. 727 759 IPR002110 GO:0005515
Pumo10g02854 1582 FunFam E3 ubiquitin-protein ligase KEG 419 649 - -
Pumo10g02854 1582 SUPERFAMILY Ankyrin repeat 474 771 IPR036770 -
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat profile. 479 512 IPR002110 GO:0005515
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat region circular profile. 513 540 - -
Pumo10g02854 1582 SMART ANK_2a 581 610 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 760 795 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 548 577 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 616 647 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 513 542 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 694 723 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 727 756 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 654 689 IPR002110 GO:0005515
Pumo10g02854 1582 SMART ANK_2a 479 509 IPR002110 GO:0005515
Pumo10g02854 1582 SUPERFAMILY RING/U-box 7 62 - -
Pumo10g02854 1582 Gene3D Transferase(Phosphotransferase) domain 1 94 394 - -
Pumo10g02854 1582 ProSiteProfiles Protein kinase domain profile. 108 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02854 1582 SMART ring_2 8 53 IPR001841 -
Pumo10g02854 1582 ProSiteProfiles Zinc finger RING-type profile. 8 54 IPR001841 -
Pumo10g02854 1582 Gene3D - 746 827 IPR036770 -
Pumo10g02854 1582 Pfam Protein kinase domain 111 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02854 1582 Pfam Mind bomb SH3 repeat domain 1458 1577 IPR040847 -
Pumo10g02854 1582 Pfam Mind bomb SH3 repeat domain 1223 1342 IPR040847 -
Pumo10g02854 1582 Pfam Mind bomb SH3 repeat domain 1348 1449 IPR040847 -
Pumo10g02854 1582 Pfam Mind bomb SH3 repeat domain 865 931 IPR040847 -
Pumo10g02854 1582 Pfam Mind bomb SH3 repeat domain 937 1057 IPR040847 -
Pumo10g02854 1582 Gene3D - 641 745 IPR036770 -
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat region circular profile. 479 500 - -
Pumo10g02854 1582 Gene3D - 420 546 IPR036770 -
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat region circular profile. 727 759 - -
Pumo10g02854 1582 Pfam Zinc finger, C3HC4 type (RING finger) 8 53 IPR018957 GO:0046872
Pumo10g02854 1582 PRINTS Ankyrin repeat signature 480 495 IPR002110 GO:0005515
Pumo10g02854 1582 PRINTS Ankyrin repeat signature 743 757 IPR002110 GO:0005515
Pumo10g02854 1582 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1200 1581 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat profile. 513 545 IPR002110 GO:0005515
Pumo10g02854 1582 CDD RING-HC_KEG-like 5 61 - -
Pumo10g02854 1582 SUPERFAMILY Protein kinase-like (PK-like) 106 397 IPR011009 -
Pumo10g02854 1582 Gene3D - 547 640 IPR036770 -
Pumo10g02854 1582 Pfam Ankyrin repeats (3 copies) 441 541 IPR002110 GO:0005515
Pumo10g02854 1582 Pfam Ankyrin repeats (3 copies) 554 633 IPR002110 GO:0005515
Pumo10g02854 1582 Pfam Ankyrin repeats (3 copies) 673 758 IPR002110 GO:0005515
Pumo10g02854 1582 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 87 IPR013083 -
Pumo10g02854 1582 ProSiteProfiles Ankyrin repeat profile. 694 726 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02854 Pumo-Chr10 57154464 57168863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02854 129 389 MAP Kinase Kinase Kinase AT4G08500 25.188 4.22e-16 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pumo10g02854 Pkinase 2.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02854 K16279 - gmx:100783181 2787.68