Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02839 ATGACAGATAAGATAGTAGACAGAAGTAATGGAGACATTACCATCGATCAATACCATCGTTATAAGGAAGATGTTGAAATCATGAAGGAAATGAATATGGATGCTTATAGATTTTCAATATCTTGGTCCAGAATCCTGCCAAAGGGAAAGGCTAGTAGAGGCGTGAATAAGGAAGGAATCAACTATTACAACAACCTCATCAATGAATTGCTAGTCAAAGAGTTGGATCGCCATGCTGCACAAAGAGCCCTTGATTTTATGTTTGGATGGTTTATGGAGCCATTGACAATTGGAGAATACCCCAATTCCATGCAATCTTTGGTAGGGAGTCGATTACCAAAGTTCTCTGCCTATCAGATCAAGCTTGTAAGAGGGTCCTTTGATTTTATTGGATTAAACTATTATACTTCTTATTATGCTACTAACGCACCTGAATTAAGTGAAGCCAGGCCTAGTTACCTCACAGATTCTCTTGTCAGTCTTACAAGTATAGATGAATTCAATGATCCAACATTATCGCTTGAGGAAGCCCTTGCCGATATTTCAAGGATTGATTACTATTATGATCATCTCTATTATCTTCGACGTGCAATCAAGTTTGGTTTTGTAGCTATTCAGGTTCATCCATCAAGAATTTTGGTTTATCCCCAGAGTATTGATTATGGTTTGTTTTGTGATTCTATTCTCTATAAATTTCTATTTGAAAGGCTCAAGCTCAATTGTGATTTTGGTCCTCCATATGCAAAATGA 750 0.3693 MTDKIVDRSNGDITIDQYHRYKEDVEIMKEMNMDAYRFSISWSRILPKGKASRGVNKEGINYYNNLINELLVKELDRHAAQRALDFMFGWFMEPLTIGEYPNSMQSLVGSRLPKFSAYQIKLVRGSFDFIGLNYYTSYYATNAPELSEARPSYLTDSLVSLTSIDEFNDPTLSLEEALADISRIDYYYDHLYYLRRAIKFGFVAIQVHPSRILVYPQSIDYGLFCDSILYKFLFERLKLNCDFGPPYAK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02839 249 Gene3D Glycosidases 75 207 - -
Pumo10g02839 249 PRINTS Glycosyl hydrolase family 1 signature 126 140 IPR001360 GO:0004553|GO:0005975
Pumo10g02839 249 PRINTS Glycosyl hydrolase family 1 signature 180 191 IPR001360 GO:0004553|GO:0005975
Pumo10g02839 249 SUPERFAMILY (Trans)glycosidases 3 204 IPR017853 -
Pumo10g02839 249 Pfam Glycosyl hydrolase family 1 74 153 IPR001360 GO:0004553|GO:0005975
Pumo10g02839 249 Pfam Glycosyl hydrolase family 1 3 73 IPR001360 GO:0004553|GO:0005975
Pumo10g02839 249 PANTHER GLYCOSYL HYDROLASE 75 201 IPR001360 GO:0004553|GO:0005975
Pumo10g02839 249 Gene3D Glycosidases 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02839 Pumo-Chr10 56624590 56629913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02839 77 163 Glycoside Hydrolase AT2G44480 57.471 1.12e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02839 K01188 - ccaj:109792158 184.882