Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02832 ATGGCAGAAACATTGGTTGGTGGTGCTCTTCTTTCTGCTTTTCTTCAGGTTGTATTTGACAGGCTGGCTTCACATCAAGTTCTGGACTTCTTTCATGGAAGAAAACTCGATGAGACGCTGCTGAACAAGTTAAACATCAAGCTGCTGTCCATCGATGCTCTGGCTGGCGATGCAGAACAAAAGCAGTTCAGAGATTCACGTGTGAGAGCATGGCTTATTGCTGTCAAAGATGCTGTGCTTGATGCAGAGGATGTCTTGGATGAAATAGACTATGAACTCTCCAAATGTGAAGTGGAAGCTGAATCTGATTCTCAAACCTGTACTTGCAAGGTACCGAATTTCTTCAATGCTTGTTTCAATTCATTTAGCAGGAAAATTGACTCAAGGATGAGACAAGTCCTTCACAAACTAGAATATCTCTCAAGCCAAAAGGGTGATTTAGGATTGAAAGAAGGCAGTGGTGTTGGTGTTGGATCAGGTAGGAAAATGCCATACAAATTGCCATCAACATCTTTACTGAGTGAAAGTGTTATATACGGTAGAGATGATGACAGAGAAATGATCATTAATTGGCTGATATCTGACAATGAGAATTGTAACCATCTATCAATACTTTCTATTGTGGGTATGGGCGGGTTGGGTAAGACCACACTTGCCCAACATGTATATAATGACTCAAAGATGGAGGATCAATTTAGTATCCAAGCTTGGGTATGTGTTTCAGATGAATTTGATGTTTTCAAGGTAACAAGAACAATTCTTGAGGCAATCACTAAATCAACTGATGATAGTAGAGACCTAGAAATGGTTCAGGGAAGGTTGAAAGAAAAATTGACAGGAAAGAGATTTCTTCTTGTTCTGGACGATGTCTGGAATGAAAATCGAGAGAACTGGGAAGCCGTGCAAACTCCACTTAATTATGGAGCTCAGGGAAGTAGCGTTCTTGTCACGACACGCAGTAAGAAAGTTGCTTCTATTATGCGGTCCAATAAAGTACATCACCTAAACCAATTACAAGAGGATCATTGTTGGCAAGTTTTTGGTAAACATGCATTCCATGATGATAATACTCTGTTAAATCCTGAGTTGAAGGAGATTGGTATAAAGATAGTTGAAAAGTGTAAAGGATTTGCCTCTAGCCTTGAAATCAATTGGAAGTCTTTTACACACAAAGTCGTCTGCTTTCGGAATGGGAAAGTGTATTAA 1206 0.3972 MAETLVGGALLSAFLQVVFDRLASHQVLDFFHGRKLDETLLNKLNIKLLSIDALAGDAEQKQFRDSRVRAWLIAVKDAVLDAEDVLDEIDYELSKCEVEAESDSQTCTCKVPNFFNACFNSFSRKIDSRMRQVLHKLEYLSSQKGDLGLKEGSGVGVGSGRKMPYKLPSTSLLSESVIYGRDDDREMIINWLISDNENCNHLSILSIVGMGGLGKTTLAQHVYNDSKMEDQFSIQAWVCVSDEFDVFKVTRTILEAITKSTDDSRDLEMVQGRLKEKLTGKRFLLVLDDVWNENRENWEAVQTPLNYGAQGSSVLVTTRSKKVASIMRSNKVHHLNQLQEDHCWQVFGKHAFHDDNTLLNPELKEIGIKIVEKCKGFASSLEINWKSFTHKVVCFRNGKVY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02832 401 Gene3D - 34 132 - -
Pumo10g02832 401 PANTHER DISEASE RESISTANCE PROTEIN RP 44 376 IPR044974 GO:0006952
Pumo10g02832 401 Pfam NB-ARC domain 183 377 IPR002182 GO:0043531
Pumo10g02832 401 Gene3D - 162 334 IPR027417 -
Pumo10g02832 401 PRINTS Disease resistance protein signature 204 219 - -
Pumo10g02832 401 PRINTS Disease resistance protein signature 277 291 - -
Pumo10g02832 401 FunFam Probable disease resistance protein At1g61300 165 332 - -
Pumo10g02832 401 Pfam Rx N-terminal domain 11 102 IPR041118 -
Pumo10g02832 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 383 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02832 Pumo-Chr10 56386745 56388053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02832 205 391 WRKY Transcription Factor Family AT5G45050 25.654 8.09e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02832 - - gmx:100777280 668.692