Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02823 ATGGCATTAGAATTGGTTGGTGGTGCTCTTCTTTCTGCTTTTCTTCAGGTTGCATTTCAGAAGCTGGCTTCTCCTCAAGTTCTGGACTTCTTTGGTGGAAGAAAACTTGATGAGACTCTTTTGAGCAAGTTGAAGGCGAAGCTGCTGTCCCTTGATGCTTTGGCTGATCATGCAGAACAAAAGCAATTCAAAGATCGACGTGTGAAAGCATGGCTTGTTGCTGTCAAAGATGTTGTGCTTGATGCAGAGGATGTCTTGGATGAAATAGACTATGAACTCTCTAAATGCAAAGTACCGAATTTCTTCAATGCTTCTTTCAGATCATTTAACAGGAAAATTGAATCAAGGATGAGACAAGTCCTTGACAAACTAGAATATCTTGCAAGCCAAAGGGGTGATCTAGGTTTGAAAGAGGCTAGTGGTGTTGGGGTCCGATTAGGATCAAGTAGTGAAGTGTCACAAAAATTGCCATCAACATCTTTTGTGGTTGATAGTGTTATTTATGGCAGAGATGATGACAAAGAAATAATCTTTAATTGGCTCACATCTGACACTGACAATCCTAATCAGCTATCAATACTTTCTATTGTGGGCATGGACGGGTTGGGTAAGACAACGCTTGCCCAACATGTATACAATGACCCAAGGATAAAGGGTAAATTTGATATCAAAGCCTGGGTGTGTGTTTCAGATGATTTTGATGTTTTCAAGGTAACAAGAACAATTCTTGAGGCAATCACTAAATCAACTGATGATAGTAGAAACCTAGAGATGGTTCATGGAAGATTGAAAGAAAAATTGACAGGGAAGAAATTTCTTCTTGTTTTGGATGATGTGTGGAACGAAAACCGAGAGAAATGGGAAGCTGTGCAGACTCCTTTAATTAATTGTGGGGCTCAGGGAAGTAGGATTCTTGTCACAACACGTAGTAAGAAAGTTACTTCTACCATGCAGTCAAAAGAACATCACTTGAAGGAATTGCAAAAAGATCATTGCTGGCAATTGTTTGCTAAACATGCATTCCAAGGTGATAATCCTCAATCAAGTCTAGACTACAAGGAGATTGGTATGAAGATAGTTGAAAAATGCAAAGGACTTCCTCTAGCCTTGAAAACAATTGGAAGTCTATTGCGCACTAAATCATCTGTTTTGGAGTGGGAAAACATTTTCAAAAGTGAGATATGGGAATTTTCAGAAGAGGATAGCGATATTGTCCCTGCTTTGAGATTGAGCTATGACCATCTTCATTCCCATCTCAAGAGATGTTTTGCTTATTGTGCCTTACTTCCCAAGGGTTATGAATTTAACAAAGAGTATTTAATTCAATTGTGGATGGCCGAAAATTTTCTACAATGGCATCAACAGAGTAAGAGTCCAGAAGAAGTTGGTCAACAGTACTTCAATGATCTATTATCAAGGTCATTCTTTCAACTATCAAACAGCATACTTAGAATTGGAACATGTTTTGTCATGCATGACCTTCTCAACGATTTGGCAAAATATGTTTGTGGGGACACCTGTTTTAGGTTGGAAGATGATCAAGCAAAAAATATACCAAAAACAACTCGTCATTTTTCATTTGCAGCCAATCACATTCATTATTTTGATGGGTTTGGAAGTTTACATGATGCTGAAAGGTTAAGTACATTTCTGCCAATATATGAAAGAATGGATTATCGTTTAATTCATTGTCGTTGGTATTGCAAGATGTCGATACATGAGTTGTTTTTCAAGTTAAAGTTCTTACGAGTCTTATCTTTGCATCATTGTTCTAGCCTTGAAGAGGTCCCTGAGTCTGTAGGCTATCTTAAACATCTCCGTCTGTTAGACCTCTCCAATACTGACATAAAAGAACTACCTAAATCAATATGTTCACTCTACAACTTGCAAACACTGAAGTTGATCCATTGTCGTTATTTGAAGGAGCTGCCCTCAAATTTGCATAAACTCACCAATTTGCGACGCCTTGAACTTATAAATACTAAACTGAGAAGGATGCCAGTGCATTTGGGAAAACTGAAAAATCTTCAAGTATTGTTGAGCTCGTTTGATGTAGGCAGAATGGGTTTGAAAAATAAAACTCACCTTTTTGAGCTAGAGTTAAATTGGGATAGGCACCGGAGCCCTGATGATTCAACAAAAGAAAGAGATGTAATTGTAATTGAGAATCTACAACCTTCCAAACACTTGGAGAAGTTGTCAATTAGCCACTATGGTGGTACAAAATTTCCAAGTTGGTTTGGAGATAAATCATTATTGAATGTGGTGTCTTTAAGGTTGTCCTACTGTAAATACTGCCTATGTTTGCCTCCCCTTGGACTTTTGCCATTTCTCAAGGACCTGAAGATTACAGGGCTTAATGGGATTGTGGTTATTGATGCTGATTTTCATGGGAACAGCTCTTCTTCATTTACATCCTTGGAAACATTGGAGTTCTCCGATACGAAAGAATGGGAAAAATGGGAATGTCAAGCTGTGATGGATGCTTTTCCACGTCTTAAACATCTTTCTCTAAGGAATTGTCCCAAGCTGAAAGGGCAACTGCCACTGCTAGAGCAACTTCTTCGTTTACAGACACTACAAATTTGGGACTGTGAAAAACTGCAATTTGATTTTCATCAGACTACTTTGAAAGCATCCAGGATTGGGATCAATGATAGCTGTGACTCTAACTTTCCGCTGGATTTCTTCCCAAAACTCAGGAGTCTTGTTCTCAGCGGGTTTGGTAATTTACAGATGATTTCACAGGTACACGCCCATAATCATCTCAAGCATCTGACAATCAGTAACCGCCCTCGATTTGAATCCTTGCCTGAACGCATGCATATTCTCCTTCCATCTCTTGAGGGTCTAGAAATCAGAGATTGTCCAAAAGTTGAGTCGTTCCCTGGCGGAGGTTTGCCATCAAATCTAAAATGGATGGATCTCCATAAATGCTCCAAACTTATGGCCTCACTGAAAGGAGCTTTGGGAGCCAATCCCTCTTTGGAAACCTTGCTAATTAGAGAACTTGATGTGGAGTCTTTCCCTAATGAAGGTTTGTTGCCACTCTCTATTACTTTTCTAGGAATCTATGCTTGTACAGATCTTAAAAAACTAGACTACAGGGGTCTCTGTCAGCTCTCCTCTCTTGAGAAATTGGTTCTTGAATACTGTCCCAACCTCCAACAGTTACCAGATCTGCCCAAATCCATTTCAGATCTTACCATTTCTGATTGTCCATTGCTCGAACAGCGTTGCCAACCAGAAGGCCGAGACTGGGGAAAGATTGCTCACATTAAAAACCTGAATATTGGACTATGGCTGAGATGTTGA 3315 0.3937 MALELVGGALLSAFLQVAFQKLASPQVLDFFGGRKLDETLLSKLKAKLLSLDALADHAEQKQFKDRRVKAWLVAVKDVVLDAEDVLDEIDYELSKCKVPNFFNASFRSFNRKIESRMRQVLDKLEYLASQRGDLGLKEASGVGVRLGSSSEVSQKLPSTSFVVDSVIYGRDDDKEIIFNWLTSDTDNPNQLSILSIVGMDGLGKTTLAQHVYNDPRIKGKFDIKAWVCVSDDFDVFKVTRTILEAITKSTDDSRNLEMVHGRLKEKLTGKKFLLVLDDVWNENREKWEAVQTPLINCGAQGSRILVTTRSKKVTSTMQSKEHHLKELQKDHCWQLFAKHAFQGDNPQSSLDYKEIGMKIVEKCKGLPLALKTIGSLLRTKSSVLEWENIFKSEIWEFSEEDSDIVPALRLSYDHLHSHLKRCFAYCALLPKGYEFNKEYLIQLWMAENFLQWHQQSKSPEEVGQQYFNDLLSRSFFQLSNSILRIGTCFVMHDLLNDLAKYVCGDTCFRLEDDQAKNIPKTTRHFSFAANHIHYFDGFGSLHDAERLSTFLPIYERMDYRLIHCRWYCKMSIHELFFKLKFLRVLSLHHCSSLEEVPESVGYLKHLRLLDLSNTDIKELPKSICSLYNLQTLKLIHCRYLKELPSNLHKLTNLRRLELINTKLRRMPVHLGKLKNLQVLLSSFDVGRMGLKNKTHLFELELNWDRHRSPDDSTKERDVIVIENLQPSKHLEKLSISHYGGTKFPSWFGDKSLLNVVSLRLSYCKYCLCLPPLGLLPFLKDLKITGLNGIVVIDADFHGNSSSSFTSLETLEFSDTKEWEKWECQAVMDAFPRLKHLSLRNCPKLKGQLPLLEQLLRLQTLQIWDCEKLQFDFHQTTLKASRIGINDSCDSNFPLDFFPKLRSLVLSGFGNLQMISQVHAHNHLKHLTISNRPRFESLPERMHILLPSLEGLEIRDCPKVESFPGGGLPSNLKWMDLHKCSKLMASLKGALGANPSLETLLIRELDVESFPNEGLLPLSITFLGIYACTDLKKLDYRGLCQLSSLEKLVLEYCPNLQQLPDLPKSISDLTISDCPLLEQRCQPEGRDWGKIAHIKNLNIGLWLRC 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02823 1104 PANTHER DISEASE RESISTANCE PROTEIN RP 41 867 IPR044974 GO:0006952
Pumo10g02823 1104 Coils Coil 41 61 - -
Pumo10g02823 1104 PRINTS Disease resistance protein signature 577 593 - -
Pumo10g02823 1104 PRINTS Disease resistance protein signature 266 280 - -
Pumo10g02823 1104 PRINTS Disease resistance protein signature 363 377 - -
Pumo10g02823 1104 PRINTS Disease resistance protein signature 193 208 - -
Pumo10g02823 1104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 426 IPR027417 -
Pumo10g02823 1104 SUPERFAMILY L domain-like 831 1091 - -
Pumo10g02823 1104 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
Pumo10g02823 1104 Gene3D Ribonuclease Inhibitor 554 876 IPR032675 -
Pumo10g02823 1104 Gene3D - 326 416 IPR042197 -
Pumo10g02823 1104 Gene3D - 35 125 - -
Pumo10g02823 1104 SMART LRR_typ_2 603 626 IPR003591 -
Pumo10g02823 1104 SMART LRR_typ_2 650 673 IPR003591 -
Pumo10g02823 1104 Pfam Rx N-terminal domain 11 105 IPR041118 -
Pumo10g02823 1104 FunFam Probable disease resistance protein At1g63360 412 501 - -
Pumo10g02823 1104 SUPERFAMILY L domain-like 490 869 - -
Pumo10g02823 1104 Gene3D Ribonuclease Inhibitor 877 1099 IPR032675 -
Pumo10g02823 1104 Gene3D - 149 325 IPR027417 -
Pumo10g02823 1104 FunFam Probable disease resistance protein At1g61300 150 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02823 Pumo-Chr10 55860922 55864377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02823 188 502 WRKY Transcription Factor Family AT5G45050 25.532 4.32e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02823 - - gmx:100777280 1318.14