Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02819 ATGGACCATGTAAAGCAAAGAGAGTTAGGTTGGTCAAGACGCTACAATATTATAGTTGGCATTGCTCGAGGAATACAGTATTTACACGAAGATTCCCAGCTTAGAATTATACATCGCGATCTCAAAGCTAGCAATGTTCTGTTAGATGAAAGTATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCAGGCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAATATGCCATGCGTGGACAGTTCTCTGTGAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGACTTTTATCAATCAAATCATGCTGATGACCTCTTGAGCCATGCATGGAAGAATTGGACAGAGCAAACACCTTTGGAGTTGCTAGATCCAACTCTGAGAGGCTCTTATTCAAGAAATGAAGTCAACAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATTTGACAGGCCTTCGATGGCCACTGTTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCGATGCCACGACAACCAGCATCTTTCCTGCGTGGAAGAAGTCCTAACATGCTAAACCGAGGGCTTGACTCTGATCAGTCTACCACCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACTGATGTATACCCTCGCTAA 723 0.4163 MDHVKQRELGWSRRYNIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDESMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLSHAWKNWTEQTPLELLDPTLRGSYSRNEVNRCIHIGLLCVQENPFDRPSMATVALMLNSYSVTMSMPRQPASFLRGRSPNMLNRGLDSDQSTTCSIPWSVNEVSITDVYPR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02819 240 FunFam Os07g0541700 protein 1 75 - -
Pumo10g02819 240 SMART serkin_6 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02819 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Pumo10g02819 240 Gene3D Transferase(Phosphotransferase) domain 1 1 199 - -
Pumo10g02819 240 SUPERFAMILY Protein kinase-like (PK-like) 4 210 IPR011009 -
Pumo10g02819 240 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 236 - -
Pumo10g02819 240 FunFam Os07g0555700 protein 76 192 - -
Pumo10g02819 240 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02819 240 Pfam Protein tyrosine and serine/threonine kinase 6 183 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02819 Pumo-Chr10 55771389 55772437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02819 1 240 Receptor kinase-like Gene Family AT4G11530 60.166 1.90e-101 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02819 PK_Tyr_Ser-Thr 9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02819 - - gmx:113000776 456.832