Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02810 ATGTGCCTATTCAAATCCTCTTCAAGCCACTTTAACTTGCTACTTGTGTCTCTGTTGATCAGCTTGGTAACCTTTGCGAGTGAAGCAGCTCCTATATACAGCAAACATGTCTGCACAGATGGATCATATTACCGACCCAACACAACATTCCAAACCAACTTAAACCTCCTCCTCTCATCCCTCGTCTCCAACGCCACCCTCCACGACGGCTTCTACCGCACCAACGTCTCCCTCGGAACCCCCGACGAGGTCAAGGGACTCTTCCTCTGCCGCGGCGACGTCACCCCCTCCGTCTGTCACGACTGCGTCACCGCCGCAGCAAAAAACATCACACAGCTCTGCACCAACCAGACAGAGTCCATAATCTGGTACGACGAGTGCACGCTGCGCTACTCCAACAGTTCCAACCTCGACAACATAGAACCAAGTGTTGACATGAAGAACGAACAGAGCGTCCCTGACTCGGACTACGCGCGGTTCAACGATATTCTTGCGCCCACCTTGAACGATGCGGCGCTGGAAGCTGTGAATTCTGCTTCGGGTAAGAAGTTTGCCACAAAAGAAGCGAATTTCACGAGCTCAATGAAGCTCTACACCCTGGCGCAGTGCACGCCCGATTTTTCCACTTCTTTATGTATCACGTGCTTCTCAAGCTCCATCGCTGCCTTTCCCAACTGCTGTGACGGCAAACGAGGTGCACGGGTCCTGCTTCCGGGTTGTAATGTCAGATATGAATTCTATCGCTTTTACAATGTTTCCACCGTGTCCCACCTTCCCTCCTCTCCCTCTTCAGGGAAAAGCAGTATCTCTATAATTGTGAGAATTGTTGTCCCAATTGTTGTTGCTATTGTACTTTTCATTGTTGGCGTCTACTTCCTACGTAAGAGGGCAAGCAAGAAGTATAATACTTTCGTCCAGGATTCAATTGTGGATGAGCTTACCGATTTGGAGTCCTTGCAATTTGACTTGGCTACAGTTGAAGCTGCCACAAACAGATTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGGGTGGTTTATAAGGGTATCTTCCCTAACGGACAAGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCAGTAGAGTTCAGGAACGAAGCTGCTCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGACTATTGGGATTTTGCTTGGAGGGACAGGAGAAGATCCTTATCTATGAATACATACTAAACAAAAGCCTTGATCACTTTTTATTTGACCCTGTAAAGCAAAGAGAGTTAGATTGGTCAAGACGCTACAATATTATAGTTGGCATTGCTCGAGGAATACAGTATTTACACGAAGATTCCCAGCTTAGAATTATACATCGCGATCTCAAAGCTAGCAATGTTCTGTTAGATGAAAGTATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCAGGCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAATATGCCATGCGTGGACAGTTCTCTGTGAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGACTTTTATCAATCAAATCATGCTGATGACCTCTTGAGCCATGCATGGAAGAATTGGACAGAGCAAACACCTTTGGAGTTGCTAGATCCAACTCTGAGAGGCTCTTATTCAAGAAATGAAGTCAACAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATTTGACAGGCCTTCGATGGCCACTGTTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCGATGCCACGACAACCAGCATCTTTCCTGCGTGGAAGAAGTCCTAACATGCTAAACCGAGGGCTTGACTCTGATCAGTCTACCACCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACTGATGTATACCCTCGCTAA 1977 0.4583 MCLFKSSSSHFNLLLVSLLISLVTFASEAAPIYSKHVCTDGSYYRPNTTFQTNLNLLLSSLVSNATLHDGFYRTNVSLGTPDEVKGLFLCRGDVTPSVCHDCVTAAAKNITQLCTNQTESIIWYDECTLRYSNSSNLDNIEPSVDMKNEQSVPDSDYARFNDILAPTLNDAALEAVNSASGKKFATKEANFTSSMKLYTLAQCTPDFSTSLCITCFSSSIAAFPNCCDGKRGARVLLPGCNVRYEFYRFYNVSTVSHLPSSPSSGKSSISIIVRIVVPIVVAIVLFIVGVYFLRKRASKKYNTFVQDSIVDELTDLESLQFDLATVEAATNRFSDENKIGQGGFGVVYKGIFPNGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYILNKSLDHFLFDPVKQRELDWSRRYNIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDESMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLSHAWKNWTEQTPLELLDPTLRGSYSRNEVNRCIHIGLLCVQENPFDRPSMATVALMLNSYSVTMSMPRQPASFLRGRSPNMLNRGLDSDQSTTCSIPWSVNEVSITDVYPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02810 658 SMART serkin_6 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02810 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 654 - -
Pumo10g02810 658 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
Pumo10g02810 658 FunFam cysteine-rich receptor-like protein kinase 10 409 611 - -
Pumo10g02810 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Pumo10g02810 658 Gene3D - 143 249 IPR038408 -
Pumo10g02810 658 Gene3D - 30 135 IPR038408 -
Pumo10g02810 658 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02810 658 SUPERFAMILY Protein kinase-like (PK-like) 319 627 IPR011009 -
Pumo10g02810 658 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Pumo10g02810 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Pumo10g02810 658 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Pumo10g02810 658 Gene3D Phosphorylase Kinase; domain 1 294 408 - -
Pumo10g02810 658 Gene3D Transferase(Phosphotransferase) domain 1 410 616 - -
Pumo10g02810 658 FunFam Cysteine-rich receptor-like protein kinase 10 142 249 - -
Pumo10g02810 658 Pfam Protein tyrosine and serine/threonine kinase 336 601 IPR001245 GO:0004672|GO:0006468
Pumo10g02810 658 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Pumo10g02810 658 Pfam Salt stress response/antifungal 158 246 IPR002902 -
Pumo10g02810 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 294 408 - -
Pumo10g02810 658 CDD STKc_IRAK 339 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02810 Pumo-Chr10 55383650 55387043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02810 4 658 Receptor kinase-like Gene Family AT4G05200 48.458 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02810 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02810 - - gmx:547727 1059.67