Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02800 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAGTTCTTGCGTCGCAAGTGCCAACCCGAGTGTGCATTTGCACCATACTTTCCCCCTGACCAGCCTCAAAAGTTTGCAAATGTTCATAGAATTTTTGGGGCAAGCAATGTCACCAAGCTTCTCAACGACTTGCACCCTCACCAACGTGAAGATGCTGTCAATTCCCTTGCTTATGAAGCCGAGATGAGGCTCCGTGACCCTGTCTATGGTTGTGTAGGAGTCATATCGCTCCTACAACACCAACTTCGCCAGCTTCAAATGGACCTCTATTGCGCGAAATCCGAACTCTCGAGGTACCAAAACTTGAGCATCACCACTAACTTGAGCTCTCTAGCCTCCGAATCTGCGGCCACGGCCTACCACCACCATCACCAGAACAATACGTCTGGTGGTGGTGGCTTCGGCCGTGACCACCACTACCACTACCATCACCATCAGTTCTTTCCCCAACACCAACAACAACAAGTGGTGAGAAGCTTTGATGCAGGTAACAACTATGATGCAAGCCTCTTGGCCATGAACATATCTGCCAGCTTAGGGCAACTCAACCAGCTTCAGCATCAGAGTGCCGCCGGTGGGGGCGATGACCGCAACCGCTCCTAG 636 0.5126 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNLSSLASESAATAYHHHHQNNTSGGGGFGRDHHYHYHHHQFFPQHQQQQVVRSFDAGNNYDASLLAMNISASLGQLNQLQHQSAAGGGDDRNRS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02800 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 149 - -
Pumo10g02800 211 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Pumo10g02800 211 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02800 Pumo-Chr10 55081247 55082247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02800 2 208 AS2 family AT1G65620 63.636 3.19e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo10g02800 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02800 - - gmx:100819502 365.155