Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02795 ATGGCTACTGAAAAGCTTGGATGTTGTGCAAAATTTTTTGCAAGCTCTAAACCCTACTTGGCCATGATCTCTTTACAATTTGGCTATGCTGGCATGAACATTATCACCAAGGTTTCCCTCAACCAAGGCATGAGCCACTATGTCCTAGTGGTTTATCGCCATGCCTTCGCCACCGCCGTCATCGCTCCTTTCGCCTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAGTTTTCATGCAAATTTTTATCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTGATGGCAGTGTTTTGCCGCATGGAGAAGATAGACATAAAGAAGGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTGGCAGGGGCTATGCTGATGACATTATACAGAGGTCCTATAGTGGAGATGGTATGGGCCAAACATCCACACAATAAGACCAATGCAACAGCCACCACAGGATCATTGGACAAAGATTGGTTATTAGGCTGCATCTTTCTCATCATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCCAAAGCTATACAAACGTACAAGAATCATCAGCTAAGCCTAACTTCACTAGTGTGCTTTATAGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAATCCTTCTGTATGGAGAATTGGCTGGGATATGAGCTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTAATTAAGAAGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGATCCTTTATCCTTGCAGAACAAATTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTATACTCAGTTCTGTGGGGAAAGCACAAAGAACAAAGAGAGAGCAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAGGATGCTCAAATTGCTGTAATTGCAGGGCCAATGATTGATGCCACTGATAATTTTACTGAAGAAAAATATGCCATCACCACCTCCCACCCCCTCCACCATCTCCATCGACCCCCTCCCCCTCCTCCGACACCACCGTCGCCTCCGCCGTCGTTCGCGCCGTCAAAGAGTGCTTCGAGGGCCTCTAACAAGCGCTGCGACTCCCTCTTCTCCGCCTCCAACCCCTCATGCACCTGGTGGAGGGCGCACGGATCTGGGTCCTGTGGTGTCAAGGGTGGTCGTGGCATGGTGCGGCTCGACAGATCTGGGTTCGTGGGGAGGTTTTAG 1383 0.4642 MATEKLGCCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFPVFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKIDIKKVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNKTNATATTGSLDKDWLLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTLQAIAVTFVVEHNPSVWRIGWDMSLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQRESKVADEIPLPVKDAQIAVIAGPMIDATDNFTEEKYAITTSHPLHHLHRPPPPPPTPPSPPPSFAPSKSASRASNKRCDSLFSASNPSCTWWRAHGSGSCGVKGGRGMVRLDRSGFVGRF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02795 460 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Pumo10g02795 460 MobiDBLite consensus disorder prediction 386 405 - -
Pumo10g02795 460 PANTHER WAT1-RELATED PROTEIN 17 342 IPR030184 GO:0016020|GO:0022857
Pumo10g02795 460 MobiDBLite consensus disorder prediction 382 411 - -
Pumo10g02795 460 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 338 - -
Pumo10g02795 460 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Pumo10g02795 460 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02795 Pumo-Chr10 54953623 54959067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02795 1 340 Nodulin-like Gene Family AT5G07050 74.493 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02795 - - gmx:100804390 716.457