Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02786 ATGGCTCCCGAGTATGCTATGGAAGGATTATTTTCAATGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATAATCTGTGGAAGAAAGAACAGTGGATTTTTTCTATCAGAACATGGTCAAAGTCTTCTTTTATATACTTGGAGAATGTGGTGTGTAGGAAAAAGTTTGGAATTGATGGATCCAGTGCTAGAAAATTCCTACATAGCCAATGAAGTTGTGAAGTGCATACAGATTGGTTTATTGTGTGTTCAAGAAGCTGCTGCAAATAGACCAATCATGTCCAATGTTGTTGTATTTTTGGCAAGTGATGGAATGACCCTTCCAAACCCTAACAAACCTGCATTCTCGGTTGGAAGAAGGACCTCGGAGGAAACATCTACTTCAAAAAGTTCCAAAAATGTTTCCATTAATGATGTATTAATCTCTAGTATTCTACCAAGGTAA 453 0.3687 MAPEYAMEGLFSMKSDVFSFGVLVLEIICGRKNSGFFLSEHGQSLLLYTWRMWCVGKSLELMDPVLENSYIANEVVKCIQIGLLCVQEAAANRPIMSNVVVFLASDGMTLPNPNKPAFSVGRRTSEETSTSKSSKNVSINDVLISSILPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02786 150 SUPERFAMILY Protein kinase-like (PK-like) 1 131 IPR011009 -
Pumo10g02786 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Pumo10g02786 150 MobiDBLite consensus disorder prediction 118 134 - -
Pumo10g02786 150 MobiDBLite consensus disorder prediction 115 134 - -
Pumo10g02786 150 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Pumo10g02786 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 145 - -
Pumo10g02786 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02786 Pumo-Chr10 53883926 53884466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02786 1 150 Receptor kinase-like Gene Family AT4G23150 49.677 7.54e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02786 PK_Tyr_Ser-Thr 1.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02786 - - gmx:100792758 258.84