Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02783 ATGGAGGAATGGCTTTACAGTGAAGCAGCTAATCTGTCAGGATGGCATTTCCAACACAGGTCTGAAAAGGAGTATGAGTTTATTAAAAAGATTGTTGATGAGGCCTCTAAGAAGATCAGTCACACTCCTTTATATGTTGCTGATAAGCCAGTAGGGTTACAGTCTTCAGTACTAGAAGTGATGTCTCTCCTAGGATCTGGGTCTGATGTCAACATGGTTGGTATTTATGGTATTGGAGGAATAGGTAAAAGTACAATTGCTCGTGCTGTATATAACATGATTGCTGATCAATTTGAAGGTTTGTGTTTTCTTGCTGACGTTAGAGAAAAAGCGATTAACAAGCATGGTCTTGTACAACTCCAAGAAACACTACTTTCTGATATACTTGGGGAGAAGGATATCAAAGTGGGGGATGTCAATAGAGGAATTCCGATAATACAGAGGAGGCTCCAACAAAAAAAGGTTCTTTTGATTTTGGATGATGTTGACAAATTGGTGCAGCTAAGGGTACTTGCAGGAGCATGCAATTGGTTTGGCTCTGGTAGCAAGATTATTATCATAACAAGAGACAAAAAGGTGCTAACCACTCATGGGGTTGTAAAATTACACGAGGCTAAACTTTTAAATAAAAAAAGAGCTTTTGAATTGTTTAGTTGGCATGCCTTTAAAAGCAACGAAGTTGATCCAAGTTATGTGCATATTCGTAACCGTGCAGTATTTTATGCATGTGGCCTTCCATTGGCTTTGGAAGTGATAGGTTCTCACTTATTTGGTAAAAGTTTAGATGAATGTAATTCTGCATTAGATAAATATGAAAGAATTCCTCATGAAGAGATCCATGATATACTTAAAGTGAGTTATGATGGTTTGGAAGAAAATGAAAAGGGGATTTTCCTTGACATTGCTTGTTTTTTCAATGCTTACAATATGGGCTTTGTCAAACAAATGCTACATGCTCATGGTTTTCATGCAGAAGATGGAATAAGAGTGTTGGCCGACAAATCTCTCATAAAGATCGACCATTCTGGTTGTGTGAAAATGCATGACTTAATTCAGGACATGGGCAGGGAAATTGTTAGGCAAGAATCAAAATCGGAGCCTAGTAGACGTAGTAGATTCACTAGATTGTGGGTTGATGACGATATTGTTCGTGTTTTGAAAGAAAATATGGGTACTGATCAAGTTGAAGCCATAATGCTCGAAGTGCATGACAAGAAGGAAGTACAGTGGAGTGGAAATGCCTTAGAGAAAATGAAAAACCTCAAAATTCTGATTATCGGACATGCAATCTTTTCTACAGGCCCCCAACATCTACCAAATAGTTTGGGGGTGCTGGAGTGGAGTTCTTATCCATCACCATCTTTATCACCTGATTTCGATCCTATAAAACTTGAGATACTCCACATGCGTCAGAGTTGCCTTGAATTCTTCCAACCACTTGAGAGGTTTAAATCCTTGATTTCAGTAAAGTTTGAAGATTGCAAGTTCCTAACTGAATTACCGAGCCTCTGTGAAGCACCATTCCTGACGCATCTGTCTCTTGATAACTGCACTAATTTAAAAAAAGTTCATGATTCGGTTGGGTTTCTTGACAATCTCCTCTCATTGAGTGCTAAAGGATGCATTCAGCTTGAAATTCTGGTACCTTGCATCCAGCTGGAATCTCTTGAGTTTTTGGATCTCACGGGGTGCTTTCGTCTTAAAAGCTTCCCAGAAGTCAAGGGAAAGATGGATAAAATAAAAAATATTTATTTAGACAGGACTGGCATAAACAAATTGCCACATTCAATTGGAAATCTTGTCGGGCTTGAACGATTGTACCTGAGACAACACACATGTCTTTATCAGCTACCAAGCAGTATCCATATGTTGCCCAATGTTGAAGTGATAATGGATTATGATCAGGGTGGATTTCAATTTTTTGAAGGATACTATGAAGACAAAGAAAAGGTGAGCTCAGAAATATCTCCTAGTGCCATGGTTGATTATAATGAAGGCTCCTTTATTTACCTTGATTTGTGTTTTCCATACATAAGCTCCCATAATGTGATCGAAGTATGTTGTCCCAATCCACTTGAGTGTCATAATTTTGATTTCTTTTTAAAATGCTTCAAGCTGGGGGCTTGA 2127 0.3841 MEEWLYSEAANLSGWHFQHRSEKEYEFIKKIVDEASKKISHTPLYVADKPVGLQSSVLEVMSLLGSGSDVNMVGIYGIGGIGKSTIARAVYNMIADQFEGLCFLADVREKAINKHGLVQLQETLLSDILGEKDIKVGDVNRGIPIIQRRLQQKKVLLILDDVDKLVQLRVLAGACNWFGSGSKIIIITRDKKVLTTHGVVKLHEAKLLNKKRAFELFSWHAFKSNEVDPSYVHIRNRAVFYACGLPLALEVIGSHLFGKSLDECNSALDKYERIPHEEIHDILKVSYDGLEENEKGIFLDIACFFNAYNMGFVKQMLHAHGFHAEDGIRVLADKSLIKIDHSGCVKMHDLIQDMGREIVRQESKSEPSRRSRFTRLWVDDDIVRVLKENMGTDQVEAIMLEVHDKKEVQWSGNALEKMKNLKILIIGHAIFSTGPQHLPNSLGVLEWSSYPSPSLSPDFDPIKLEILHMRQSCLEFFQPLERFKSLISVKFEDCKFLTELPSLCEAPFLTHLSLDNCTNLKKVHDSVGFLDNLLSLSAKGCIQLEILVPCIQLESLEFLDLTGCFRLKSFPEVKGKMDKIKNIYLDRTGINKLPHSIGNLVGLERLYLRQHTCLYQLPSSIHMLPNVEVIMDYDQGGFQFFEGYYEDKEKVSSEISPSAMVDYNEGSFIYLDLCFPYISSHNVIEVCCPNPLECHNFDFFLKCFKLGA 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02783 708 PRINTS Disease resistance protein signature 72 87 - -
Pumo10g02783 708 PRINTS Disease resistance protein signature 551 567 - -
Pumo10g02783 708 PRINTS Disease resistance protein signature 149 163 - -
Pumo10g02783 708 PRINTS Disease resistance protein signature 242 256 - -
Pumo10g02783 708 Pfam NB-ARC domain 59 274 IPR002182 GO:0043531
Pumo10g02783 708 Gene3D Ribonuclease Inhibitor 392 635 IPR032675 -
Pumo10g02783 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 301 IPR027417 -
Pumo10g02783 708 Gene3D - 207 291 IPR042197 -
Pumo10g02783 708 SUPERFAMILY "Winged helix" DNA-binding domain 278 387 IPR036390 -
Pumo10g02783 708 SUPERFAMILY L domain-like 399 630 - -
Pumo10g02783 708 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 634 IPR044974 GO:0006952
Pumo10g02783 708 Gene3D - 32 201 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02783 Pumo-Chr10 53562401 53564987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02783 8 630 WRKY Transcription Factor Family AT4G12020 33.901 8.06e-82 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02783 - - gmx:100802408 1157.9