Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02779 ATGTCTGAAGAACCACGGAGTTTTGTGGTGATCCACTATGCATCAAGAGACTTCAATACAAGTGCCATTAAGATGGTCCTGCAGGGATATTCACTTGGGCATGGAGACAAGCTTACACTTCTTGTAGTTCTTCGCCATGCTAATAGTCCCAGTAGGATTCCCTTCATTGCACCTGCCAGATTGCGTGGATTATTTGAGACTGATCACAAAATTGTTGAGGAAGAGGTTGCCAATAAGAAGAAAAAAGAGCTCCTTAATAATGCAAGCATAAGGGAAATCTCTGAGCAGTGTGAAGCAGACAGGATCCAGTTCCGGATAGAAGTTCTTCAAGGCAATTTTCCAGAGGTTGCTTTAAATGCTGCCATCCTTTCGGAGGCAACATCTGTGATACTTGAGAGACAGATGAAGAAATATAAGAAGGATTTCAAACAGAGTCTCTCTTGTGCTTTGCTAATAATGAACCGTGACAACACTTTGCGACTCTTGAGAGGACCAAGGGAAACACATCTGTATGATAGAAGCAATGGCAATGCAAATTTTGCAAGAAGTTCTAATTCTAAATCTCCACCAAGAAAACAGCAAGTGGCAAATGCAATTTTCTGCTCCAATTACAGCTCTTCAATTCAAACTGTTACAAAGATTGTGTGCCCCCAGCCTCGTTCTCAAATGAAACAATTCCATGATAAGAGAGAACAAGACATGGCAAGAGGGTATTGCCTATTACCCACTCCTGATACTCAAAAGACTAATCATACTGAATTGTATCACATAGAGACACCAGTGAAACATATCAGCAACCATGAAGCATATCAAATAGTTGAACAATTTAAAAATTCTGTTTGCTCAGTATGCAAGAACAGAAGACCGAAATTTGAACCGATGAAAGAATTCACATACACGGAGCTGCAGGAAGCCACAAAGGGTTTTTCCCCAAAGAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGAACGCTGCAAGGAGGACTCAGGATTGCTGTGAAGCAACATAAGTGTGCAAGCCTTCAAGGAGAGAAGGAATTCAAATCTGAGGTCAATGCACTCAGCAGAGCAATACATGAGAATGTGGTCATGCTGCGTGGATCTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTTGTTTGCAATGGCTCACTTGACCAACATTTATCGCAACACTCACGTAAACCTCTTAGCTGGGCAGAAAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGCTTATTGTTCTTGCATCAGAACAACATAATACACAGAGATATGAGACCTAGTAACATCCTTGTCACACATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATGTTGTTGGAACTATAGGGTATTTGGCACCAGAATATGCAGAATCTGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGCAGACAAACGGCTTGGCGATAAAAGTCTTGTGGGATGGGCAAGGCCACTATTGAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGAATGATGGATAA 1614 0.4102 MSEEPRSFVVIHYASRDFNTSAIKMVLQGYSLGHGDKLTLLVVLRHANSPSRIPFIAPARLRGLFETDHKIVEEEVANKKKKELLNNASIREISEQCEADRIQFRIEVLQGNFPEVALNAAILSEATSVILERQMKKYKKDFKQSLSCALLIMNRDNTLRLLRGPRETHLYDRSNGNANFARSSNSKSPPRKQQVANAIFCSNYSSSIQTVTKIVCPQPRSQMKQFHDKREQDMARGYCLLPTPDTQKTNHTELYHIETPVKHISNHEAYQIVEQFKNSVCSVCKNRRPKFEPMKEFTYTELQEATKGFSPKNYLSEGGFGSVYKGTLQGGLRIAVKQHKCASLQGEKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLSWAERIKVAIGAAKGLLFLHQNNIIHRDMRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTADKRLGDKSLVGWARPLLKERNYPDLIDERNDG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02779 537 SUPERFAMILY Protein kinase-like (PK-like) 294 506 IPR011009 -
Pumo10g02779 537 Gene3D Transferase(Phosphotransferase) domain 1 385 537 - -
Pumo10g02779 537 Gene3D Phosphorylase Kinase; domain 1 273 384 - -
Pumo10g02779 537 FunFam Proline-rich receptor-like protein kinase PERK8 271 384 - -
Pumo10g02779 537 ProSiteProfiles Protein kinase domain profile. 309 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02779 537 ProSitePatterns Tyrosine protein kinases specific active-site signature. 426 438 IPR008266 GO:0004672|GO:0006468
Pumo10g02779 537 MobiDBLite consensus disorder prediction 172 192 - -
Pumo10g02779 537 PANTHER OS01G0750732 PROTEIN 199 534 - -
Pumo10g02779 537 Pfam Protein tyrosine and serine/threonine kinase 313 502 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02779 Pumo-Chr10 53147695 53151853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02779 297 534 Trihelix Transcription Factor Family AT5G38560 50.000 3.40e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pumo10g02779 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02779 - - gmx:100810950 933.324