Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02775 ATGCCTATAGGAGAAGCATTTTTGTCAGCTTTCCTTCAAGTTTTGTTTGACAGGATGGCCTCAAAGAATGTTATAGAGGTTATTCTTGCAGGAGACAACGGCAAAATCCTAAAGAAATTTCAGAAGACTTTGCTGCTCCTCAAAGCAGTACTTAATGATGCAGAGGACAAGCATGTAAAGAATGAAGCTGTGAGAATGTGGCTGGTTGAGCTTAAAGATGTTGCTTTTGATGCAGAAGATGTTTTAGATAGGTTTGCTACTGAAGTATTGAAGAGGAGGTTGGAATCAATGTCTCAATCTCAGGTTCAAACCACCTTTGCTCAAGTATGGAATCTTGTCCCAACTTCTCTCAATCCAAGTAATTTAATGTTTGATGTTGAGATAGAATCTAAGATAAAGGTGATCACTGAGAGACTAGAGACTCTTGCAAATGAAAGGTATGAACTTGGTTTAAGTGAGGTTGCTGCTGGATGTTCATACAAAATCAATGAAACAAGTTCCATGGTGAATGAGTCCTACATACACGGCAGAGACATCGACAAAAAGAAGATTGTTCGGCTGCTGATGGAGAATAGGCCAAGTCATGGTGATGAAGTCTTAGTCATTCCCATTGTGGGAATGCCAGGGGTTGGGAAAACTACATTGGCTCAGGTTGTGTTCAATGACGACGAGGTGAATACGCACTTTGAACTCAAGGCATGGGTATCTGTACCTGATGATTTTGATGTCAAGGTTGTAACTGGAAAGATTCTAGAATCAGCCACTTCCATAAGCTGTGATTTCAATAACTTGCATCAGCTTCAAGTTAAACTCAAAGCAGCCTTGAGTGGCAAGAAGTTTCTGATTGTTCTGGATGATGTGTGGAACAAGAATTACAACGAATGGATTAATCTGGTTGCTCCATTCAGAGGAGCTGCTCGCGGAAGCTCGGTGATTGTAACAACAAGGAGTGCAGAAGTTGCCAACATGATGGGAACTGTTGAATCTCACTATGTCAACCAGTTGTCTGATAAGGACTGTTGGTCAGTGTTTGTGCAGCATGCTTTTAGGAGTAAAACTATTGATACAAATCAAGCCTTTGCAGAAATTGGTAAGAAGATTGTTGAGAAATGCAAAGGCTCACCATTAACAGCAACAACACTAGGGGGTATTTTATCCTCACAGCAAGATGAAAGAGAGTGGGAAAATGTAATGAATTTTGAAATATGGGATCTTGCAGATGAAGAAAGTAACATCCTCCAAACATTAAGATTGAGTTATAATCAGCTTCCTTCATACCTGAAGAGGTGTTTTGCATACTGCTCCATACTACCAAAAGGCTTTGAATTTGAGGAGAAAGAGATAGTATTGCTATGGATGGCTGAAGGACTTTTGGAGCAAAAATCACAGAAGCAAATGGAAGATGTCGGTCATGAATACTTTCAAGAGCTACTCTCTGCATCACTTTTTCAAAGGTCAAGTAGCAACAGATCATTGTATGTAATGCATGACCTTATCAATGATCTAGCTCAATGGGTGGCTGGAGAGTCCTGTATCAAATTGGACAATAGTTTTCACTCTCACAGAAAAAAGAAAAAGAAAATTTCCAAAAGGACTCGCAAGCTGCCTAATTCGGTTAGCAACTTGAATCTTCTACGGTACCTGAATCTTTCTTGGACTAACCTCAGAGAGTTGCCAGAATCAATATGCAGCCTATGCAATCTTCAAACATTACTACTAAGAGATTGTTTTAATCTTGAGCAGCTGCCATCAAACTTGAGTGATTTGGTCAACCTACGTCATCTAGATACCAATGGAGCACATTCTTTAACAGGTATGCCCCATGGTATTGGTAAATTGACACATCTTCAAACATTGTCAAATTTTGTTGTAGGCTCAAGTGGGATAGGAGAATTGATGAAGCTATCAAATATCCGAGGAGTACTTTCTGTGTCCAGGTTAGAGCATGTGACCGATTCTCAAGAGGCAAGTGAAGCTATGTTAAATAAGAAGGTAGGCATTGATGTGCTGAAATTGAAGTGGAGTTGTATGAATAACCAGTCACATATTGAAAGAGCAAAAGAAGTGCTTCAGATGCTACAACCTCACAAAAATCTTGCAAAGCTTACTATTAAGTGCTATGGTGGTACAAGTTTCCCAAAATGGATAGGTGATCCATCCTACAAGAGCCTAGTGTTCTTAAAGTTGAAAGATTGTGCACATTGTACATCTTTGCCAGCACTTGGAAACCTCCATGCCCTCAAAGAACTTTACATCATTGGAATGAAAGAAGTATGCTGCATTGATGGTGGGTTCTGTGGTAATGCTTGCTTGAGACCTTTTCCTTCCTTGGAGAGACTATACTTTACGGACATGGAAAAATGGGAAAATTGGTTCCTCTCTGACAACAATGAGCAGAATGACATATTTTCTTCTTTGCAACAGCTTTTCATTGTGAGGTGTCCCAAACTTTTGGGTAAACTACCAGAAAATCTCCCTTCTCTCAAACATGTAGTAGTTAAAGAATGTGAACAATTGCTGGTTACCATTTCAAGCCTTCCTGTGCTCTACAAACTAGAAATTGAGGGATGCAAAGGCTTGGTCCTTAATTGCGCAAATGAGTTCAATTCACTGAATTCCATGTATGTTACCAGAATCTTGGAGTTCACATTATTAATGGAGAGGTTAGTACAGGCATTCAAAAATGTAGAAGAACTCAAAATTGTCAGTTGTGCTCTTGATGAAACAGTTCTTAATGATTTATGGGGAAATGAAGTTTGGCTTGAGAAGAATCCACATGGTTTGTCATCCATGCTCAGATTAATTGAGATTAGAAATTGCAATGTCATGAAATCCATACCTAAAGTACTAATGGTCAACAGCCATTTTCTCGAACGCTTGTACATATGTAACTGTGATTCCGTAGTCTTTGTCACAATGGATCAACTGCCTCCCTCTCTGAAATCATTGGAGATATCAAATTGCAAGAACTTGAGATGCTTACTGGATAATGAAACATGCACTTCATCAATAATTATGCATGATGACAATGTACAGCACAGTGGCACAATCATTTCTCATTTGGAGTATGTATACATTGGCTGGTGTCCATCTCTTACATGCATATCAAGAAGTGGTGAGTTACCTGAATCTGTCAAACTTTTGTTCATATGGAACTGTTCAGAGCTATCATGCTTGTCAATGAAAGGCCAATTACCAAAAAGTCTTGAGAAACTGGAGATTCAATCCTGTCCAAAGCTAGAGTCAATAGGCAAACAGGTTGCACAGAAACACCTTCCTTGGAATCTATTCAGATATGGAACTGTGAAAACCTCAAATCCCTCCCTGAAGGATTGCATTTCCTTGTGA 3348 0.3937 MPIGEAFLSAFLQVLFDRMASKNVIEVILAGDNGKILKKFQKTLLLLKAVLNDAEDKHVKNEAVRMWLVELKDVAFDAEDVLDRFATEVLKRRLESMSQSQVQTTFAQVWNLVPTSLNPSNLMFDVEIESKIKVITERLETLANERYELGLSEVAAGCSYKINETSSMVNESYIHGRDIDKKKIVRLLMENRPSHGDEVLVIPIVGMPGVGKTTLAQVVFNDDEVNTHFELKAWVSVPDDFDVKVVTGKILESATSISCDFNNLHQLQVKLKAALSGKKFLIVLDDVWNKNYNEWINLVAPFRGAARGSSVIVTTRSAEVANMMGTVESHYVNQLSDKDCWSVFVQHAFRSKTIDTNQAFAEIGKKIVEKCKGSPLTATTLGGILSSQQDEREWENVMNFEIWDLADEESNILQTLRLSYNQLPSYLKRCFAYCSILPKGFEFEEKEIVLLWMAEGLLEQKSQKQMEDVGHEYFQELLSASLFQRSSSNRSLYVMHDLINDLAQWVAGESCIKLDNSFHSHRKKKKKISKRTRKLPNSVSNLNLLRYLNLSWTNLRELPESICSLCNLQTLLLRDCFNLEQLPSNLSDLVNLRHLDTNGAHSLTGMPHGIGKLTHLQTLSNFVVGSSGIGELMKLSNIRGVLSVSRLEHVTDSQEASEAMLNKKVGIDVLKLKWSCMNNQSHIERAKEVLQMLQPHKNLAKLTIKCYGGTSFPKWIGDPSYKSLVFLKLKDCAHCTSLPALGNLHALKELYIIGMKEVCCIDGGFCGNACLRPFPSLERLYFTDMEKWENWFLSDNNEQNDIFSSLQQLFIVRCPKLLGKLPENLPSLKHVVVKECEQLLVTISSLPVLYKLEIEGCKGLVLNCANEFNSLNSMYVTRILEFTLLMERLVQAFKNVEELKIVSCALDETVLNDLWGNEVWLEKNPHGLSSMLRLIEIRNCNVMKSIPKVLMVNSHFLERLYICNCDSVVFVTMDQLPPSLKSLEISNCKNLRCLLDNETCTSSIIMHDDNVQHSGTIISHLEYVYIGWCPSLTCISRSGELPESVKLLFIWNCSELSCLSMKGQLPKSLEKLEIQSCPKLESIGKQVAQKHLPWNLFRYGTVKTSNPSLKDCISL 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02775 1115 Gene3D - 426 504 IPR036388 -
Pumo10g02775 1115 Gene3D Ribonuclease Inhibitor 512 834 IPR032675 -
Pumo10g02775 1115 Gene3D - 12 118 - -
Pumo10g02775 1115 Gene3D Ribonuclease Inhibitor 1013 1093 IPR032675 -
Pumo10g02775 1115 Gene3D Ribonuclease Inhibitor 843 1012 IPR032675 -
Pumo10g02775 1115 Coils Coil 37 57 - -
Pumo10g02775 1115 PANTHER DISEASE RESISTANCE PROTEIN RP 60 788 IPR044974 GO:0006952
Pumo10g02775 1115 SUPERFAMILY L domain-like 921 1084 - -
Pumo10g02775 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 434 IPR027417 -
Pumo10g02775 1115 FunFam Probable disease resistance protein At1g61300 158 329 - -
Pumo10g02775 1115 SUPERFAMILY L domain-like 494 901 - -
Pumo10g02775 1115 Gene3D - 334 424 IPR042197 -
Pumo10g02775 1115 Pfam Rx N-terminal domain 7 99 IPR041118 -
Pumo10g02775 1115 FunFam Probable disease resistance protein At1g63360 420 504 - -
Pumo10g02775 1115 PRINTS Disease resistance protein signature 975 991 - -
Pumo10g02775 1115 PRINTS Disease resistance protein signature 371 385 - -
Pumo10g02775 1115 PRINTS Disease resistance protein signature 201 216 - -
Pumo10g02775 1115 PRINTS Disease resistance protein signature 274 288 - -
Pumo10g02775 1115 Gene3D - 159 330 IPR027417 -
Pumo10g02775 1115 Pfam NB-ARC domain 181 422 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02775 Pumo-Chr10 53119391 53123407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02775 198 395 WRKY Transcription Factor Family AT5G45050 25.123 1.40e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02775 - - gmx:100784811 1034.25