Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02773 ATGCGCAGAATATTGATCCATGGATGGGTTTGTTTAACCGAAGGATGGCCTCAAAGGAATGTTATAGAGGTTATTCTTGCAGGAGACAAAGGCAAAATCCTAAAGAGATTTCAGAAGACTTTGCTGCTCCTCAAAGCAGTACTTAATGATGCAGAGGACAAGCATGTAAAGAATGAAGCTGTGAGAATGTGGCTGGTTGAGCTTAAAGATGTTGCTTTTGAAGCAGAAGATGTTCTAGATAGGTTTGCTACTGAAGTATTGAAGAGGAGGTTGGAATCAATGTCTCAATCTCAGGTTCAAACCACCTTTGCTCAAGTATGGAATCTTGTCCCAACTTCTCTCAATCCAAGTAATTTAATGTTTGATGTTGAGATAGAATCTAAGATAAAGGTTATCACTGAGAGACTAGAGACTCTTGCAAATGAAAGGTATGAACTTGGTTTAAGTGAGGTTGCTGCTGGATGTTCATACAAAATCAATGAAACAAGTTCCATGGTGAATGAGTCCTACATACACGGCAGAGATATCGACAAAAAGAAGATTATCCGGTTGCTGATGGAGAATAGGCCAAGTCATGGTGATGAAGTCTTAGTCATTCCCATTGTGGGAATGCCAGGGGTTGGGAAAACTACATTGGCTCAGGTTGTGTTCAATGACGACGAGGTGAATACGCACTTTGAACTCAAGGCATGGGTATCTGTACCTGATGATTTTGATGTCAAGGTTGTAACTGGAAAGATTCTAGAATCAGCCACTTCCATAAGCTGTGATTTCAATAACTTGCATCAGCTTCAAGTTAAACTCAAAGCAGCCTTGAGTGGCAAGAAGTTTCTGATTGTTCTGGATGATGTGTGGAACAAGAATTACAACGAATGGATTAATCTGGTTGCTCCATTCAGAGGAGCTACTCGCGGAAGCTCGGTGATTGTAACAACAAGCAGTGCAGAAGTTGCCAACATGATGGGAACTGTTGAATCTCACTATGTCAACCAGTTGTCTGATAAGGACTGTTGGTCAGTGTTTGTGCAGCATGCTTTTAGGAGTAAAACTATTGATACAAATCAAGCCTTTGCAGAAATTGGTAAGAAGATTGTTGAGAAATGCAAAGGCTCACCATTAACAGCAACAACACTAGGGGGTATTTTATCCTCACAGCAAGATGAAAGAGACTGGGAAAATGTAATGAATTTTGAAATATGGGATCTTGCAGATGAAGAAAGTAACATCCTCCAAACATTAAGATTGAGTAATAATCAGCTTCCTTCATACCTGAAGAGGTGTTTTGCATACTGCTCCATACTACCAAAAGGCTTTGAATTTGAGGAGAAAGAGCTAGTATTGCTATTGATGGCTGAAGGACTTTTGGAGCAAAAATCACATAAGCAAATGGAAGATGTCGGTCATGAATACTTTCAAGAGCTACTCTCTGCATCACTTTTTCAAAGGTCAAGTAGCAACAGATCATTGTATGTAATGCATGACCTTATCAATGATCTAGCTCAATGGGTGGCTGGAGAGTCCTGTATCAAATTGGACAATAGTTTTCACTCTCACAGAAAAAAGAAAAAGAAAATTTCCAAAAGGACTCGATATGCATCATACATTGGTGGTGAATATGATGGTGTTCAAATGTTTCAGGCCTTTAAAGAAGCCAAGTCCTTAAGAGCATTCCTCCCTCTGAAGCATCCAAGGCTAGAAGAATGGTCCTACATAACTAATCATGTTCCTTTTCAATTGTTACCTGAGTTAAAATGCTTAAGGGCATTATCATTGAGTGGATATTTCATCAGCAAGCTACCTAATTCGGTTAGCAATTTGAATCTTCTACGGTACCTGAATCTTTCTTGGACTAACCTCATAGAGTTTCCAGAATCAATATGCAGCCTATGCAATCTGCAAACATTACTACTGAGAGATTGTTTTAATCTTGAGCAGCTGCCATCAAACTTGAGTGATTTGGTCAACCTACGTCATACCAGTGGAGCACATTCTTTAACAGGTATGCTCCATGGTATTGGTAAATTGACACATCTTCAAACATTGTCAAATTTTGTTGTAGGCTCAAGTGGGATAGGAGAATTGATGAAGCTATCAAATATCCGAGGAGTACTTTCTGTGTCCAGGTTAGAGCATGTGACCGATTCTCAAGAGGCAAGTGAAGCTATGTTAAATAAGAAGGTAGGCATTGATGTGCTGAAATTGAAGTGGAGTTGTTGTATGAATAACCAGTCACATATTGAAAGAGCAAAAGAAGTGCTTCAGATGCTACAACCTCACAATTAA 2283 0.3942 MRRILIHGWVCLTEGWPQRNVIEVILAGDKGKILKRFQKTLLLLKAVLNDAEDKHVKNEAVRMWLVELKDVAFEAEDVLDRFATEVLKRRLESMSQSQVQTTFAQVWNLVPTSLNPSNLMFDVEIESKIKVITERLETLANERYELGLSEVAAGCSYKINETSSMVNESYIHGRDIDKKKIIRLLMENRPSHGDEVLVIPIVGMPGVGKTTLAQVVFNDDEVNTHFELKAWVSVPDDFDVKVVTGKILESATSISCDFNNLHQLQVKLKAALSGKKFLIVLDDVWNKNYNEWINLVAPFRGATRGSSVIVTTSSAEVANMMGTVESHYVNQLSDKDCWSVFVQHAFRSKTIDTNQAFAEIGKKIVEKCKGSPLTATTLGGILSSQQDERDWENVMNFEIWDLADEESNILQTLRLSNNQLPSYLKRCFAYCSILPKGFEFEEKELVLLLMAEGLLEQKSHKQMEDVGHEYFQELLSASLFQRSSSNRSLYVMHDLINDLAQWVAGESCIKLDNSFHSHRKKKKKISKRTRYASYIGGEYDGVQMFQAFKEAKSLRAFLPLKHPRLEEWSYITNHVPFQLLPELKCLRALSLSGYFISKLPNSVSNLNLLRYLNLSWTNLIEFPESICSLCNLQTLLLRDCFNLEQLPSNLSDLVNLRHTSGAHSLTGMLHGIGKLTHLQTLSNFVVGSSGIGELMKLSNIRGVLSVSRLEHVTDSQEASEAMLNKKVGIDVLKLKWSCCMNNQSHIERAKEVLQMLQPHN 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02773 760 Pfam Rx N-terminal domain 34 96 IPR041118 -
Pumo10g02773 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 431 IPR027417 -
Pumo10g02773 760 Gene3D - 23 115 - -
Pumo10g02773 760 Gene3D - 156 327 IPR027417 -
Pumo10g02773 760 FunFam Probable disease resistance protein At1g61300 155 326 - -
Pumo10g02773 760 SUPERFAMILY L domain-like 491 709 - -
Pumo10g02773 760 PRINTS Disease resistance protein signature 198 213 - -
Pumo10g02773 760 PRINTS Disease resistance protein signature 368 382 - -
Pumo10g02773 760 PRINTS Disease resistance protein signature 604 620 - -
Pumo10g02773 760 PRINTS Disease resistance protein signature 271 285 - -
Pumo10g02773 760 Gene3D - 416 502 IPR036388 -
Pumo10g02773 760 FunFam Probable disease resistance protein At1g63360 417 501 - -
Pumo10g02773 760 Gene3D - 331 415 IPR042197 -
Pumo10g02773 760 PANTHER DISEASE RESISTANCE PROTEIN RP 57 751 IPR044974 GO:0006952
Pumo10g02773 760 Gene3D Ribonuclease Inhibitor 520 747 IPR032675 -
Pumo10g02773 760 Coils Coil 34 54 - -
Pumo10g02773 760 Pfam NB-ARC domain 178 396 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02773 Pumo-Chr10 52984289 52989128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02773 195 379 WRKY Transcription Factor Family AT5G45050 25.263 8.82e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02773 - - ccaj:109818945 1244.18