Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02768 ATGGCTAAGGAAGCATCCTTTTCCTACGATGTATTCCTCAGCTTCAGAGGAGAAGACACGCGAATGGGTTTTACTGGAAGCCTCAACCATGCTCTGGGTCAGAGGGGAATCCGTACCTTCTTTGACGACAAGGAGCTTCGAAAAGGAGAGGAACTGACCCCAGCACTTTCCAAGGCAATTCAACAATCAAGGATTGCCATCGCTGTGCTCTCTCAGAACTATGCTTTTTCGTCCTTTTGCTTGGATGAACTCGCTACCATCCTTGACTGCTTCCAGGAGAAGAAGCAGCCCAGGCTTGTTTTACCTGTCTTTTACGGCGTCGATCCCTGCGACGTGCGACATCTGAGAAAGAGTTACGGAGAAGCATTTGCTAAGCACGAGGAGAGGTTCAAGAATGACAAGGACAAGTTCAAAGATAGCAGGGAGAAGTTCAAGTTCGAAGAGAAGATCAAGAAATGGAAGGAGGCTCTTCATATGGCAGCTAATCTGTCTGGCTTTCCTTATAATCATGGGGATGGATACGAATATGAATTTATTTGGAGGATCTTGAAGGAAGTCTCTACAAAGATTAATCGTACTCTTTTACACGTTGCTAAATACCCAGTTGGATTGGAGTCTAGAGTGCGTGAAGTAAACTCCCTTCTAAATGCTGAGTCTGAATCTGATGGTGTCGTCTACATGGTTGGGATCCATGGGATCGGTGGAATTGGTAAAAGTACAATTGCTCGAGCTGTATATAATTCCATTAGTGATCACTTTGAAGGCTTGTGTTGTTTTCTTGATGATGTGAGAGTGAATTCAGTTAAATATGGCTTAGTACATCTCCAAGAGGCCGTTCTTTCTGTGATTCTTGGAGACAAGGATACTCGACTGCAAAATGTGAACGAAGGAATATCAACACTTAGGCAAAGGCTCCAGAAGAAGAAGGTTCTTTTGGTTCTTGACAATGTTGACAAAATAGAGCAGCTTGAGGCTATTGTAGGAGGACTTGATTGGTTTGGTTCTGGCAGCAGAGTCATCATTACAACTCGGGAGGTGCGTTTGCTGCAACTGCATGGAATTAAAAAGACATATCCAGTGCAGGAATTAAGTGACACAGAAGCTATTGATTTGCTTAGATGGAATGCTTTCAAAACTGACAAAATTGATCCAAGATACACAAACATTTTAAACCGTGCAGTCACTTATGCTTCTAGGCTTCCGTTGGCTTTGGAAGTAATAGGTTCCAACTTATTTGGAAAAGGAGAGGAGGAATGCAAACTTATATTAGATCGATATGACAAAATTATTGATAAAAAGATCCAAGATGTACTTAAAGTAAGTTTTGATTCCTTGGAGGAAGAGGAGAAGAAAGTTTTTCTTGACATTGCTTGTTGCTTTGGAGGATTCAAATTGTCAGATGTTGAAAATATACTTCATGCCCATCATGGTTCATCAGTGAGACTTAGTATTGAACTGTTGATTGAAAAATCTCTCATAAAAATTGATGATGGTCTTCTGACATTACATTCGTTGCTACAAGACATGGGTAGAGAAATCGTGCGAGAGGAATCACAACAAGAGCCTTGTGAACGTAGTAGGTTATGGTTCTATGAAGATGTAGTTCAGGTTTTAGAAGAAAATAAGGGAACTAGCAAAATTCAAATCATGATTCTGGATTTCCCCAAAGATAGAGTGCACTTGAAAGGACACGAAGGTGAAGAAGTGCATTGGGATGGAGAGGCCATCAAGGAGATGAAAAACCTCAAAACCCTTATTATAAGAAATGGTCATTTTTCCAAAGGCCCCACACATCTTCCTAATAGTTTAAGAGTGTTGAAATGGTCAAGATATCCTTCACCATCTTTACCATGTAGTTTTAATCCAAAGAGACTCTCCATTCTTGAGTTACAAGACAGTTGCTTAAAGCAGTGTGAACCAATCCAGATGTTGCAATGTTTGACAGTTTTGGATTTCAGCTATAGTGATTACATAACTGAGATACCTGATGTAACTGGCATCAAAAATTTAGAAAAATTATCATTTAAACATTGTGAGAATTTAACTAAAATACACGATTCAGTTGGATACCTGGAAAATCTTAAAATCTTGGATGCTTCTAGTTGCAAGAATCTTAAGGCTTTTCCACCCATCAAATTGATATCTCTTACACAACTCAATCTTTCACATTGCTCAAAGCTTGAGGTTTTCCCAGAAATATTGGGGAAGATGGAAAATATAACAGAACTTCATATAACTGGGAGTCCCATAAAAGAATTGCCATTTTCCATTCAAAACCTTACTCGGCTTCGAAAATTAGAACTGCAACTCTGTGGAATTGTTTGGATACCAAGTAGCATTGTCATGTTGCCAGAACTGGGTTCAATGTGTGTTTCGCAATGTGAAGGGTTGCAGTTATCTATTCTGGACAAAGGTGAGAAAATGGTGTCCAAGTCTTCAAACATGGAGTGTCTTGTTCTGTCGTACTGCAATATATTAGATGACTTCTTTCCAACAGGTCTCACTTTGTTTGCCAATGTGAAAGATTTAAACCTGTCCGGGAATAATTTTACAGTTCTTCATGCATGCTTTGATGAATGTCACCTTTTGAGGAACCTTAAGCTGGATGACTGCAAATCCCTAAAAGAAATTAGAGGGATTCCAGTGAAATTAGAAACATTGTCTGTGAAAGGATGCAGGACCTTAAAATTCTTAGACCTTACAGTTCTTCCTGCATGCACTGAAGAATGTCACTCTTTGAGGGAGCTGGTTTTGGATGATTGTCTGTTTCTTCAAGAAATTAAAGGGGTTCTACCAAACTTGGATCACTTCTCTGCAAAAAACTGCACATCCCTGTCATCCACCTGTACAAGCATGTTGCTGAATCAGAAATGGGTAGAGACTGGGAACAAGATGTTTCTTTTGCCAGGAACAAAGATTCCAGAGTGGTTCACACGCCATACAAGGGGAGGGTCTATGTCTTTCTGGTTTCGTAACAAATTCCCAGCAATTTCTCTCTGTCTTGTTATTGGAGTGGTGGATGGGCAACCTATCCTGGTGAAGTTTAGTCCCGTAATATTCATCAATGACAAGAAACAGTCCCTTGGCATTCAGAAACTTTATGAGCTCAGGATGAAAACGGATCATATGTTTTTGTTCGATGTACAACTGCTGAAATTTGAAGATAATGAGGATTTAGTGTTTCCAGATAATGAGTGGAATCATGTGGAGGTTTCATATGCAGATCATACTATCAATGATGAGGTCCAAACACTAGCTCCCAAATATAGTGGTATCCATGTATTTCAACAAACAAGTGGCGCGGATGATATCCAATTCAGCAACCCTGTGAATTTGGATCCAAATTCAGAACGGCATGCTAAAAGAGTTACAACAAAATGCCCTCTGAAAGAGCAGACTATGGTGCTGTCTACGCCAATTCTCACATCCATCCAACCTATACCTACTGAAGTTGAAACAGGCCAAACCTCTGGACCAACACTTTCAGATTCTGACTCAGATGATCCCTTTAATTTGGTTGATGAAAAACTCTCTGTCGTCAGTGGCAAAAAGGGAACCATATCTTTGGGAGATGCATCTCTAGTATCTGTCAGAGAGGCCATAGATGCGTTGGAGTTGTTAATGATTAAGGATTTACATGAAGTCTCTTCTGATCCTGCCATGCAGTCTCAACTTGATCACTTCTTGAATCTATTGACTACAAGTAGCCACCATAAGGTGACGGTAAAGGTGAGGGAGGCTCTTATCGAGTTCCAGATAAATGCCTTTGAATCATTCCAAGAATTCCAAGCTACTATTGAGCCAGTGAACAAACTGAAGAATTTTGAGAAGCAGAAAGCTGGAATCCAAGAGGAGACTTCAGCAGGCAGGAATAGTCGGAAGGATCTCAAAAGCTCTATAAAGAAGGCTTCTTTGGCCATCAAAGCCGAAAACAGTAGGAAGAAGGAGCTAGAGTCAGAAATTGCAAATATAAGGAAACAAATAGATACCAAAGAAATGGACCTCAAACAGCTTGTGTTGAATGTCAAAAATCAGGAAGCAGAACTCTCAACCTATGTGAATAGTCGTGATTCTCTTGATGAGCAAGCTCGAGCACTATCTAAAGAAACTGATGATCTACTTGCAGCAAACAAGGGAATAGAGGATGAGGGTAAAGCAGCTGAAGTAAAGCAGCATATGCTCAAGTCCACCTGGTCTACTGACCTACCTAGCCAACTTAATAAGATCAAGAATAGCATTCTTGGCCTCTGA 4251 0.4032 MAKEASFSYDVFLSFRGEDTRMGFTGSLNHALGQRGIRTFFDDKELRKGEELTPALSKAIQQSRIAIAVLSQNYAFSSFCLDELATILDCFQEKKQPRLVLPVFYGVDPCDVRHLRKSYGEAFAKHEERFKNDKDKFKDSREKFKFEEKIKKWKEALHMAANLSGFPYNHGDGYEYEFIWRILKEVSTKINRTLLHVAKYPVGLESRVREVNSLLNAESESDGVVYMVGIHGIGGIGKSTIARAVYNSISDHFEGLCCFLDDVRVNSVKYGLVHLQEAVLSVILGDKDTRLQNVNEGISTLRQRLQKKKVLLVLDNVDKIEQLEAIVGGLDWFGSGSRVIITTREVRLLQLHGIKKTYPVQELSDTEAIDLLRWNAFKTDKIDPRYTNILNRAVTYASRLPLALEVIGSNLFGKGEEECKLILDRYDKIIDKKIQDVLKVSFDSLEEEEKKVFLDIACCFGGFKLSDVENILHAHHGSSVRLSIELLIEKSLIKIDDGLLTLHSLLQDMGREIVREESQQEPCERSRLWFYEDVVQVLEENKGTSKIQIMILDFPKDRVHLKGHEGEEVHWDGEAIKEMKNLKTLIIRNGHFSKGPTHLPNSLRVLKWSRYPSPSLPCSFNPKRLSILELQDSCLKQCEPIQMLQCLTVLDFSYSDYITEIPDVTGIKNLEKLSFKHCENLTKIHDSVGYLENLKILDASSCKNLKAFPPIKLISLTQLNLSHCSKLEVFPEILGKMENITELHITGSPIKELPFSIQNLTRLRKLELQLCGIVWIPSSIVMLPELGSMCVSQCEGLQLSILDKGEKMVSKSSNMECLVLSYCNILDDFFPTGLTLFANVKDLNLSGNNFTVLHACFDECHLLRNLKLDDCKSLKEIRGIPVKLETLSVKGCRTLKFLDLTVLPACTEECHSLRELVLDDCLFLQEIKGVLPNLDHFSAKNCTSLSSTCTSMLLNQKWVETGNKMFLLPGTKIPEWFTRHTRGGSMSFWFRNKFPAISLCLVIGVVDGQPILVKFSPVIFINDKKQSLGIQKLYELRMKTDHMFLFDVQLLKFEDNEDLVFPDNEWNHVEVSYADHTINDEVQTLAPKYSGIHVFQQTSGADDIQFSNPVNLDPNSERHAKRVTTKCPLKEQTMVLSTPILTSIQPIPTEVETGQTSGPTLSDSDSDDPFNLVDEKLSVVSGKKGTISLGDASLVSVREAIDALELLMIKDLHEVSSDPAMQSQLDHFLNLLTTSSHHKVTVKVREALIEFQINAFESFQEFQATIEPVNKLKNFEKQKAGIQEETSAGRNSRKDLKSSIKKASLAIKAENSRKKELESEIANIRKQIDTKEMDLKQLVLNVKNQEAELSTYVNSRDSLDEQARALSKETDDLLAANKGIEDEGKAAEVKQHMLKSTWSTDLPSQLNKIKNSILGL 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02768 1416 Gene3D - 190 355 IPR027417 -
Pumo10g02768 1416 PRINTS Disease resistance protein signature 689 705 - -
Pumo10g02768 1416 PRINTS Disease resistance protein signature 397 411 - -
Pumo10g02768 1416 PRINTS Disease resistance protein signature 304 318 - -
Pumo10g02768 1416 PRINTS Disease resistance protein signature 227 242 - -
Pumo10g02768 1416 Coils Coil 1300 1362 - -
Pumo10g02768 1416 Gene3D - 7 189 IPR035897 -
Pumo10g02768 1416 Gene3D - 362 446 IPR042197 -
Pumo10g02768 1416 Pfam NB-ARC domain 209 414 IPR002182 GO:0043531
Pumo10g02768 1416 SUPERFAMILY L domain-like 569 927 - -
Pumo10g02768 1416 MobiDBLite consensus disorder prediction 1148 1167 - -
Pumo10g02768 1416 Pfam TIR domain 9 155 IPR000157 GO:0007165
Pumo10g02768 1416 SUPERFAMILY "Winged helix" DNA-binding domain 432 539 IPR036390 -
Pumo10g02768 1416 SMART till_3 8 163 IPR000157 GO:0007165
Pumo10g02768 1416 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 192 - -
Pumo10g02768 1416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 456 IPR027417 -
Pumo10g02768 1416 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 774 IPR044974 GO:0006952
Pumo10g02768 1416 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 166 IPR035897 -
Pumo10g02768 1416 Gene3D Ribonuclease Inhibitor 715 956 IPR032675 -
Pumo10g02768 1416 Gene3D Ribonuclease Inhibitor 570 711 IPR032675 -
Pumo10g02768 1416 ProSiteProfiles TIR domain profile. 7 190 IPR000157 GO:0007165
Pumo10g02768 1416 MobiDBLite consensus disorder prediction 1148 1168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02768 Pumo-Chr10 52240365 52246412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02768 5 818 WRKY Transcription Factor Family AT4G12020 30.368 1.78e-76 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02768 - - mtr:25501119 1511.51