Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02767 ATGGCTGGGGAAGCAACTTTTCACTACGATGTGTACATCAGCTTCAGAGGTGAGGATACACGGATGGGTTTTGCTTCGCATCTCTACAATGCTCTCATTCAAAGGAGTTTCCATGTCTTCATTGATGATATGTCTCTCCAAAGGGGAGAGGAAATCTGGCCAGCAATTTCCAAGGCAATTGAAGGATCCAGGATTGCAATTATTTTGTTCTCTCGGAACTACGCTTCTTCTAGGTGGTGTTTAGAAGAACTCGCCTTCATCGTTGACCGCATTCAGGAGAAGAAGCTTAGGCATGTTTTACCTGTTTTTTATGGCGTCGATCCTTCGGATGTGCGGCATCAGAGAGGGAGTTATGGAGAAGCATTGGCCTGGCATGAGGAGAGGTTCAAGGATGACATAGAGAAGGTCAAAAGATGGAAGGTGGCTCTGACTTGCGCAGCTAGCTTAACTGGTTTCCATTTCCAGTTTGGGTATGAATATGAATATGAATTGATTGCGAGGATCATTGATGCAGTCTCAAGTCAGATTAAAGTCCGACTTCGCGTTCCTTTACATGTTGCTGATTACCCAGTTGGATTGGAGTCTCGAATGCTTAAAGTAACGTCGCTTCTGAATGTTGAGATTGATGATGAAGTCCGTATGGTAGGGATCCATGGTACTGGTGGAATTGGCAAAACTACAATTGCCCGGGCAGTATTTAATTCCATCAGTGACCAATTTGAATGCTCGTATTTTCTTGAAGATGTGAGAGTGAATTCAGCTAAACATGGCTTAGTACATCTCCAAGAGATGGTTCTCTCTGCAATACTTGGAGACATGAATATTGACTTACGAAATGTGAATCAAGGAATTTTGGAAATAAAGGAAAGGCTGAGAAGGAAAAAGGTTCTTTTGGTTCTTGACGATGTTGACAAAATAGAGCAGCTGCAGGCTGTTGTAGGAGGACTTGGTTGGTTTGGTTCTGGCAGCAGGGTTATCATTACAACTCGGGAGGAGCGTTTGCTGGCATTGCATAGGGTTGAAAGCTCATATAGGGTGGAGGAACTAAGTGACAAAGAAGCTCTTTCTTTGCTTACTTGGAATGCTTTCAAAACTGACAAAGTTGATCCAAGTTACACAGACATGTTAAACCGTGCAGTGACTTATGCTTCTAGGCTTCCATTGGACTTGCAAGTAATGGGTTCCTACTTATTTGGAAAAAGTATAGATGAATGGAATGAAGCATTAAACCAGTATGAAGAGATTTCTGATAAGGAGATCCATATGAAACTTAAACTAAGCTTTGATTCCTTGGAGGAAGATGAGAAAGGCATTTTTCTTGACATTGCTTGTTTCTTCAATGGACAAAAATTGACAGACATTGAAGATATACTTTGTGCTCATCATGGTTTATCCACAAAAATTAGTATTGAGGCATTGGTTGCAAAATCTCTCATAAACATTGATGATGGTCTTGTGATATTACATGACTTGATACAAGACATGGGTAGAGAAATTGTTCAACAGGAATCACGATATGAGCCTGGGAAACGTAGTAGGTTATGGTTCTTTAAAGATGTAGTTCAAGTTCTAGAACAAAATGCGGGATCAAGTACAATTGAAAGCATATTTCTGGATTTCCCCAAAGATGATGGACCCAAAGGTGAAAGAGTGCATTGGGATGGAGAGGCCTTCAAGAAGATGAAAAACCTCAAAACACTTATTATTAGAAATGGTCATTTTAACAAAGGCCCCGCACATCTTCCTCCAAGTTTAAGAGTGCTGAAATGGTGGGGATATCCATCACCATCTTTACCTGATGATTTTCATCCAAAGAAGCTTGCCATACTCGAATTACCAGAAAGTTGCTTAAGGATAAGTGCACCAATTCAGGGGTTTGTGTGTCTGACAGTTTTGGATTTTGGCTACTGTGAACGGATAACTTGTATACCTGATGTATCTGGCCTCCCAAATTTAGAAAAATTATCTTTTAAACACTGTGAGAATTTAAGTGAAATTCACCAATCAGTTGGATTTCTAGATAAACTTAGAATCTTGGATGCTGTTTGTTGCAAGAAACTTAGGACTTTTCCACCCATCAGAATGACCTGTCTTGAACAATTCAATCTTTCCCATTGCTCAATTCTTGAGGGTTTCCCAGAAATATTGGGGAAGATGGAAAATATAATGGAACTTCATATAACTGGGAGTCCCATAAAAGAATTGCCATTCTCAATTCAAAACCTTACTCGGCTTCAAAAACTAGAACTGCAACTCTGTGGAATGGTTTGGATACCAAGTAGCATTGTCATGTTGCCAGAACTGGGTTTGATGTGTGTTTCACAATGTGAAGGGTTGCAGTTAACTAAACTGGACAAAGGTGAAAAAATGGTGTCCAAGTCTTCAAACATGGAATGTCTTATTCTGTCGTACTGCAATATATCAGATGACTTCCTTCCAACAGGTCTCACTTTGTTTGCCAATGTGAAAGATTTAAACCTGTCTGGGAATAATTTCAAAGTTCTTCGTGCATGCTTCAAAGAATGTCACCTTTTGAGGAACCTCAAGCTGGAAGACTGCAGATTTCTAAGCAAAATTAAAGGGATTCCATTGAAATTAGAAACATTGTCTGTGAAAGGATGCAGGTCCTTAAAATGCTTAGACCTTACAGTTCTTCCTGCAAGCACTGAAGGATGTCACTTTCTGAAGGAACTCATTTTGGATGATTGTGTGTATCTTCAAGAAATTGGAGGACTTCTACCAAAGTTGGATCATTTCTCTGCGAAAAATTGCACATCCTTGACTAAGAGGTGTGCAAGCATGTTGCTGGATCAGGAATCTATAGAGGGTGGAAATAAGATGTTTTCTTTGCCAGCAACAAAGATTCCAGAGTGGTTTGCACTCCGTACAGGTGGAGAGTCAATAAGCTTCTGGTTCCGTAACAAATTCCCTGCAATTTATATCAGTCTTGTTATTGGACCTGTGGATGAGCAATCTATCACAGTCAAATTTAGCCCCAGAATATTCATCAATAGCAATAAACTGTTCCTTGGGAATCGGAAACCTTACGAGTTCAGCATAGCAACGGATCATATATTTTTGTTTGATATACAGTTGCTAAATTTTGAACATAATGCGGACATAATCCTTTCAGATGATAATTGGAATCGTGTGGAGGTTTCATATGCCGATCACATTACCAACCACGAAATCCCAATCAGATTGGCTGCCAAATATAGTGGAATCCATGTATTTAAACAAACAAGTGGCATGGAGGATGTCAAATTCACCAAACCTCCACAAGCAATGATTGAGATTACGACAGATAGATCCCAGAAAGACCAGACAATGTTGCTGGCTTCGCCTATTCTCAAAAGTGACCTAGCCCCTCGACCAACACCTTCAGTTGAGTGGCCTTGGGAAGATGTTCAAGGAGAAACTTCAGAGTATCTTCAAGAGGATGAAGTTCATCCTACTACAGTTCAAAATGACCCTCTGCACATTGAAAGACATGAGGGTGATGATATCAATCTGGAAGCAGTATCCACCAGTGAACTTGAATCTGAAGACTCTTCTTCCAACATTACAGATTCTGATTCAGATGATCCCTTTGATCTTGTTGATAAAAAACTGTGTGTTCGTGGCGAGGAAACCATATCTTCTGAGGCACGTTCTGGAGATGCATCTCTAACATCTATTAGAGAGACCATAGGTGCCTTGGAGCTGTTAATGATTAAGGACTTATCTGAAGTCTCTTCTGATCCTTTCATGCAGTCTCAACTTGATCACTTCTTGGATCTATTGACTACAAGTAGCCATCCAAGGGTGACAATAGAGCTGAAGGGGGCTCTTGTTGAGTTCAAGACAAAGGCCTTTGCTTCCTTCCAAGAATTCCAAGCTGCTGCTGAGTCTGTGAACAAACTGAAGAACTTTGAGAAGCAAAAGGCAAGGATTCAGAAGGAGACTTCAGCAGGCAAGGATCAGCGGAAGGATCTCAAAAGCTCAGTAAAGAAGGCTTCTTTGGCCATCAAGGCTGAAAACAGTAGGAGGAAGGAGCTAGAGGCAGAAATTGCAACTTTAAGGGAACAACTAGCTATCAAGGAAATGGATCTTGAACAACTTGTGTTGAATGTCAAGAATCTGGAGGCAGAACTCTCGACCTCTTTAAAGAATTGTGATGCTCTTGACAAGCAAGCTCTAGCACTGTTTAAAGAAGCTGATGATCTACTCGCTGCAAACAGTGGAGTAGAGGATGAGGGTAAAGCTGCTGAAGTAAAGCAGAATTTACTCAACTCAACCTGGTCCACTGACCTAATAAGCCAGCTTAGTAAGATTAAGAATTACATTCTTGGCCTCTCTGAGTAA 4344 0.4068 MAGEATFHYDVYISFRGEDTRMGFASHLYNALIQRSFHVFIDDMSLQRGEEIWPAISKAIEGSRIAIILFSRNYASSRWCLEELAFIVDRIQEKKLRHVLPVFYGVDPSDVRHQRGSYGEALAWHEERFKDDIEKVKRWKVALTCAASLTGFHFQFGYEYEYELIARIIDAVSSQIKVRLRVPLHVADYPVGLESRMLKVTSLLNVEIDDEVRMVGIHGTGGIGKTTIARAVFNSISDQFECSYFLEDVRVNSAKHGLVHLQEMVLSAILGDMNIDLRNVNQGILEIKERLRRKKVLLVLDDVDKIEQLQAVVGGLGWFGSGSRVIITTREERLLALHRVESSYRVEELSDKEALSLLTWNAFKTDKVDPSYTDMLNRAVTYASRLPLDLQVMGSYLFGKSIDEWNEALNQYEEISDKEIHMKLKLSFDSLEEDEKGIFLDIACFFNGQKLTDIEDILCAHHGLSTKISIEALVAKSLINIDDGLVILHDLIQDMGREIVQQESRYEPGKRSRLWFFKDVVQVLEQNAGSSTIESIFLDFPKDDGPKGERVHWDGEAFKKMKNLKTLIIRNGHFNKGPAHLPPSLRVLKWWGYPSPSLPDDFHPKKLAILELPESCLRISAPIQGFVCLTVLDFGYCERITCIPDVSGLPNLEKLSFKHCENLSEIHQSVGFLDKLRILDAVCCKKLRTFPPIRMTCLEQFNLSHCSILEGFPEILGKMENIMELHITGSPIKELPFSIQNLTRLQKLELQLCGMVWIPSSIVMLPELGLMCVSQCEGLQLTKLDKGEKMVSKSSNMECLILSYCNISDDFLPTGLTLFANVKDLNLSGNNFKVLRACFKECHLLRNLKLEDCRFLSKIKGIPLKLETLSVKGCRSLKCLDLTVLPASTEGCHFLKELILDDCVYLQEIGGLLPKLDHFSAKNCTSLTKRCASMLLDQESIEGGNKMFSLPATKIPEWFALRTGGESISFWFRNKFPAIYISLVIGPVDEQSITVKFSPRIFINSNKLFLGNRKPYEFSIATDHIFLFDIQLLNFEHNADIILSDDNWNRVEVSYADHITNHEIPIRLAAKYSGIHVFKQTSGMEDVKFTKPPQAMIEITTDRSQKDQTMLLASPILKSDLAPRPTPSVEWPWEDVQGETSEYLQEDEVHPTTVQNDPLHIERHEGDDINLEAVSTSELESEDSSSNITDSDSDDPFDLVDKKLCVRGEETISSEARSGDASLTSIRETIGALELLMIKDLSEVSSDPFMQSQLDHFLDLLTTSSHPRVTIELKGALVEFKTKAFASFQEFQAAAESVNKLKNFEKQKARIQKETSAGKDQRKDLKSSVKKASLAIKAENSRRKELEAEIATLREQLAIKEMDLEQLVLNVKNLEAELSTSLKNCDALDKQALALFKEADDLLAANSGVEDEGKAAEVKQNLLNSTWSTDLISQLSKIKNYILGLSE 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02767 1447 Gene3D - 348 432 IPR042197 -
Pumo10g02767 1447 Gene3D Ribonuclease Inhibitor 554 716 IPR032675 -
Pumo10g02767 1447 Pfam TIR domain 9 172 IPR000157 GO:0007165
Pumo10g02767 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 442 IPR027417 -
Pumo10g02767 1447 Coils Coil 1329 1391 - -
Pumo10g02767 1447 MobiDBLite consensus disorder prediction 1175 1193 - -
Pumo10g02767 1447 Gene3D - 176 342 IPR027417 -
Pumo10g02767 1447 ProSiteProfiles TIR domain profile. 7 176 IPR000157 GO:0007165
Pumo10g02767 1447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 756 IPR044974 GO:0006952
Pumo10g02767 1447 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 152 IPR035897 -
Pumo10g02767 1447 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 178 - -
Pumo10g02767 1447 SUPERFAMILY L domain-like 488 907 - -
Pumo10g02767 1447 Gene3D Ribonuclease Inhibitor 717 949 IPR032675 -
Pumo10g02767 1447 PRINTS Disease resistance protein signature 647 663 - -
Pumo10g02767 1447 PRINTS Disease resistance protein signature 214 229 - -
Pumo10g02767 1447 PRINTS Disease resistance protein signature 383 397 - -
Pumo10g02767 1447 PRINTS Disease resistance protein signature 290 304 - -
Pumo10g02767 1447 Coils Coil 1294 1314 - -
Pumo10g02767 1447 MobiDBLite consensus disorder prediction 1175 1195 - -
Pumo10g02767 1447 Pfam NB-ARC domain 200 418 IPR002182 GO:0043531
Pumo10g02767 1447 Gene3D - 7 175 IPR035897 -
Pumo10g02767 1447 SMART till_3 8 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02767 Pumo-Chr10 52230748 52237050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02767 9 825 WRKY Transcription Factor Family AT4G12020 31.641 1.69e-82 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02767 - - mtr:25501119 1546.95