Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02748 ATGGCTGTTGCCAAGAGCAACAGCAGCAGTGAACATTCAACTTCATATAATTGTTACAAAGTAGCAAGCTTGACCGAAACCATAATAGACACGAACCAAATCTCTAATTTGAAAGATCGATATGTTCTTGGAGAGCAGTTGGGTTGGGGGCAATTTGGTGTCATAAGAGCATGCTCTGACAAGCTGACTGGGGAGGTTTGGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTTACTTCAGATGATCAGCAGAGTGTTAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGATTTTGTTCATTTGGTGATGGAGCTTTGTGCCGGAGGAGAGTTGTTTCATCTGTTAGAGAAGCATGAACGGTTTTCTGAATTTGAAGCCAGGGTTCTCTTTAGGCAACTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTGGCAACTAGAGGTTCCTCATCTCCAATTAAATTGGCTGACTTTGGGCTTGCAACCTACATCAAGCCTGGTACTTGCTTTTTTTGCTTCCTTTGCAGATATTAA 621 0.4171 MAVAKSNSSSEHSTSYNCYKVASLTETIIDTNQISNLKDRYVLGEQLGWGQFGVIRACSDKLTGEVWACKSIAKDRLVTSDDQQSVKLEIEIMARLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHERFSEFEARVLFRQLMQMVLYCHENGVVHRDLKPENILLATRGSSSPIKLADFGLATYIKPGTCFFCFLCRY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02748 206 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pumo10g02748 206 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 194 - -
Pumo10g02748 206 SMART serkin_6 41 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02748 206 FunFam Calcium-dependent protein kinase 1 43 126 - -
Pumo10g02748 206 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Pumo10g02748 206 Gene3D Phosphorylase Kinase; domain 1 42 126 - -
Pumo10g02748 206 SUPERFAMILY Protein kinase-like (PK-like) 38 197 IPR011009 -
Pumo10g02748 206 Gene3D Transferase(Phosphotransferase) domain 1 127 199 - -
Pumo10g02748 206 Pfam Protein kinase domain 41 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02748 206 ProSiteProfiles Protein kinase domain profile. 41 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02748 Pumo-Chr10 51529959 51530579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02748 34 199 EF-hand Containing Proteins AT5G12180 50.000 2.08e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo10g02748 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02748 - - pvu:PHAVU_004G122500g 340.117