LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g02737	ATGTCGCTGAATATGAAAACCCTAACGCAAGCATTGGCGAAGACCGCGGCGGTGATCGAGAAGACAGTGCAGACGACGGTGCAGGAGGTGACGGGCCCCAAGGCACTTCAGGACTACGAGCTGCTCGACCAGATCGGCTCTGCGGGGCCCGGGCTCGCCTGGAGGCTCTACTCGGCCCGGGCCCGTGATCCCTCGCGGCAGCACCAATATCCCGTGGTGTGTGTGTGGGTCTTGGACAAGCGCACTCTTTCCGAGGCCCGAATGCGCGCGGGCCTCACCAAGGCCGCCGAGGATTCCTTTCTAGATTTGATTCGGACAGATGCCGCTAAGCTCGTTCGCCTCAGGCATCCCGGGGTCGTTCACGTCGTCCAGGCCCTCGATGAGAGCAAGAATGCAATGGCTATGGTCACCGAACCCTTGTTTGCTTCCGCTGCCAATACCCTTGGCATTGTTGACAATATTCCTAATCTTCCTAAAGATCTCAGGGGAATGGAAATGGGACTTTTGGAGGTGAAGCATGGTTTACTTCAGATAGCAGAATCCCTCGACTTTCTCCACAACCATGCTCATCTTATTCATCGAGCTCTATCACCTGAGAACATTCTGATCACCTTGAGTGGAGCTTGGAAACTTGCTGGATTTGGTTTTGCAGTTTCTGCTACTCAGACCTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATTCTGAATATGATGTTGAGGACTCTATTTTGCCACTTCAGCCATCACTTAATTACACCGCTCCTGAGCTAGTGAGGAGCACTATGTCTTCGGCTGGGTGCTCATCTGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCCCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGACGCATTCTCATCTATCCCATCAGAACTGGTTCCTGACTTGCAAAGGATGCTTTCTCCAAATGAGTCTTCCAGGCCAACAGCAATGGATTTTACAGGCTCACCATTTTTTAGGCATGACTCTAGGTTGCGTGCTCTACGCTTCCTTGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCACGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTGGTGATACAGCCGATGATTCTGCCAATGGTTCTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCCCTTGTCCCTGTCTTGAGTTCCGCTGCTGGTGAGACACTATTACTACTTGTGAAGCATGCTGAGCTTGTAATAAACAAGACTAGTCAAGAGCATTTAGTTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATACTGATGCTCGTTTGCAAGAAGAGGTCCTGAAAAAATCTGTATCGCTTGCCAAACAACTAGATGCCCAGCTCGTGAAACAAGTGGTTTTGCCCCGTGTTCATGGATTAGCACTTAAAACAACAGTTGCGGCGGTTAGAGTCAATGCGTTGCTGTGCCTAGGAGATATGGTTAACCGGCTTGATAAACATGCTGTCTTGGACATCTTGCAAACTATTCAACGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTAGGGGTTGCAAATTCTATTTTCAAGCAGTATGGAGTAGAATTTGTAGCTGAGCATGTTCTTCCATTGCTTATGCCCCTCCTGACTGCTCAACAATTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAGCGAGGAGTGGCTGTGACTGATTCTGGAATGCCAGAGGTAAAAGTATCTCCCATGGTTAATGGCCTTCAATCCGAAGCCATGCGGACAAGCAGCAGCACTGTACCTGCTTCAACAAAAAGCAGCTCTTGGGATGAAGATTGGGGTCCCAAAACAAAGGGCACTGCCTCTTCTATCCAGAATTCTATTGATGCAACCGGTCAATCTATGGCAGGCAACTCTGTGGGACAAGTAGCATCTTTACAAAAGCATTTGTCCTTAGCTGCTTTATCTGCTCAGCAAACAACCAAGTCATGTCCCTCAGTGGGTGTAGAATGGCCACCTCGTGCATCTTCTGGTGTTACCCCACAATTTGGTGATACTGAAAGGCAGACAATAGCAGCAGGAACTTCATCCACATCTAATCTTGAATCTGATGATCCTTTTGCTGATTGGCCTCCACGTCCTAATGGCTCAGTATCAGGTGGATCTGGAATATCCAACAATGGTGCTTTAGGAATGCCACTAAACAAAGTTGGGTTTAATTCAATGACAAGCACTTCAAGCAATATGGGTCCCCAAACTAGCAACAGTTGGCCTATTAATTCCCAAAGTTCTGCAGAGTCCATTAGTTTGAACTCAAGGAATGCTAGTTCAACCATGGGTAGCCTGAATAGTGGTGGCCTTGCACAACAGAATTCTCTTGGGTTCTTAAAACAAACTCATGCTTTTCCAGCATCGAATGTTTCATATAATAATGTTCAGTCAACAGCAACAGATCTTGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCGCCTAAACTTGCACCACCCCCTTCAACCACCGTGGGTAGAGGACGAGGAAGAGGGAGGGGAGCTGCTTCAACCACTCGGTCCTCTCATACCAAGTCACATGCTGAGCAGCCACCCCTTTTGGATTTGTTGGGGTAG	2790	0.4695	MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKALQDYELLDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRTLSEARMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASAANTLGIVDNIPNLPKDLRGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRALSPENILITLSGAWKLAGFGFAVSATQTSGDSSNLQPFHYSEYDVEDSILPLQPSLNYTAPELVRSTMSSAGCSSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSDAFSSIPSELVPDLQRMLSPNESSRPTAMDFTGSPFFRHDSRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLSSAAGETLLLLVKHAELVINKTSQEHLVSHVLPMIVRAYDDTDARLQEEVLKKSVSLAKQLDAQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGMPEVKVSPMVNGLQSEAMRTSSSTVPASTKSSSWDEDWGPKTKGTASSIQNSIDATGQSMAGNSVGQVASLQKHLSLAALSAQQTTKSCPSVGVEWPPRASSGVTPQFGDTERQTIAAGTSSTSNLESDDPFADWPPRPNGSVSGGSGISNNGALGMPLNKVGFNSMTSTSSNMGPQTSNSWPINSQSSAESISLNSRNASSTMGSLNSGGLAQQNSLGFLKQTHAFPASNVSYNNVQSTATDLGSIFSSNKNEQIAPKLAPPPSTTVGRGRGRGRGAASTTRSSHTKSHAEQPPLLDLLG	929

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g02737	929	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	37	920	-	-
	Pumo10g02737	929	MobiDBLite	consensus disorder prediction	644	663	-	-
	Pumo10g02737	929	Pfam	Protein kinase domain	104	344	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo10g02737	929	SUPERFAMILY	Protein kinase-like (PK-like)	34	348	IPR011009	-
	Pumo10g02737	929	ProSiteProfiles	Protein kinase domain profile.	39	344	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo10g02737	929	MobiDBLite	consensus disorder prediction	717	782	-	-
	Pumo10g02737	929	MobiDBLite	consensus disorder prediction	732	757	-	-
	Pumo10g02737	929	Gene3D	Transferase(Phosphotransferase) domain 1	160	347	-	-
	Pumo10g02737	929	SUPERFAMILY	ARM repeat	345	608	IPR016024	-
	Pumo10g02737	929	MobiDBLite	consensus disorder prediction	881	929	-	-
	Pumo10g02737	929	MobiDBLite	consensus disorder prediction	644	676	-	-
	Pumo10g02737	929	CDD	PK_SCY1_like	45	346	-	-
	Pumo10g02737	929	Gene3D	-	348	621	IPR011989	-
	Pumo10g02737	929	MobiDBLite	consensus disorder prediction	794	836	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo10g02737	104	349	CBL-interacting serine-threonine protein kinases	AT2G26980	24.096	2.02e-11	65.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL2	Pumo10g02737		Pkinase	4e-24	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g02737	K17541		-	gmx:100796211	1700.26