Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02730 ATGGCTGCCATTGAGGAGCTTGTTGATTCAATACGCCAACCTGTGCCCGTCTCCAACTCTACGGAAAAGTTGATTCCCTCATGGGATGAAGTGATAGAGAATGGTTTGCGACAATTTGGGTGGTCAGGGATGGTGCAATGCATCCTTGTGTCCACTGCTATGTACTTTGATGCACAGCAATCCTTCATGGCCATCTACTCTGACGACTACCCAACTTGGCACTGCACCGATCCCACCACATGCACCTCTGATTCTAATATCTGCAAGCTTCCAAAGTCTTCATGGGCTTGGGATGGACCCTCTTCTAAGACAATCATATCACAGTTTGGCCTTGAATGTGCCAGCAGCTTCATCACAGGTTTACCTCAATCTTCTTTCTTCATCGGTTGCCTTCTCGGTTCCTTTCTTCTTGCCACCTTGGCTGATACATCTCTTGGAAGAAAGAATCTCCTCTTGCTGTCTTGTTTATCAATGTCTATATCTTCTATGATCATTGTCTTCTCCACCAATGTTTGGATCTACTCCGCCTTTAAATTCCTCATTGGGTTTTGGCGTTCATCCATTGGAACATGTGCTCTGGTGTTGCTGACTGAGAAAGTGAGCACTGAGTGGAGGTTCACAGTGGGTATTGTAGAATATTTCTGCTTCACATTGGGGTATATGGCCTTGCCTGGAATAGCTTATCTAAACAGAAATTCTTCATGGAAAACTCTTTATGTGTGGACATCCATTCCTGCCATTGGTTACTCTATCATTGCTTACCTTTTTGTTACCGAGTCTCCAAGGTGGCTTCTCATGCAAGGTCGAGAGAAAGAAGCCATGGCAATGCTTAAAGGAGTTCCTTCACTAGAAAATGGTGCTAATTTAACTGCAAGCCTACTGAAAGTTCCTGCTACTAAACAAAAGTCTTCAATTTTCCCACTTTACTCATCAATAGCAGAGTTGTTTGAGAGACGTTGGGCTCTTAAACGGATGGTGGCGATTATGGTGCTTGGTCTTGGGATTGGAATGGTGTATTTTGGCATGCCTTTGGCCGTGGGGAACTTGGGATTCGACATTTACTTGGCAGTTGTGTTTAATGCCTTGATGGAAATACCCTCTTGTGTAGCCACCTACTTCTTGGAAAACTATAGAAGAAAGCCATCTATTCTTGCGTTCTCAGTAGCAAGTGGGATATGCTGTATATTGTGTGTGGTCGTAGGCAGTGAGCTGCAAGTAGCTAAGGTGGGGCTATCATTGGTAGCATTTTTTAGTGCTGTCACAGCCTATAACGTGTTCCTCATTTACATTATAGAGCTGTTTCCCACGAGTGTAAGGAACACCACAACCTCATTGGTGAGGCAAGCCATTGTATTTGTTAACATATTCAGCCCATTTTTGATATCTGCGGGGAGGAAAAATGATATTTTCTCCTATGGCGTGTTTGGAGTAGTTATAATGTCATCCTGTTTGACTTTGGTCTGTTTGCCAGAGACCATTGGAATTGCACTTTGTGATACCATGGATCAACAAGAGAAAAAGGACAACTTATCTGTGTAA 1539 0.4353 MAAIEELVDSIRQPVPVSNSTEKLIPSWDEVIENGLRQFGWSGMVQCILVSTAMYFDAQQSFMAIYSDDYPTWHCTDPTTCTSDSNICKLPKSSWAWDGPSSKTIISQFGLECASSFITGLPQSSFFIGCLLGSFLLATLADTSLGRKNLLLLSCLSMSISSMIIVFSTNVWIYSAFKFLIGFWRSSIGTCALVLLTEKVSTEWRFTVGIVEYFCFTLGYMALPGIAYLNRNSSWKTLYVWTSIPAIGYSIIAYLFVTESPRWLLMQGREKEAMAMLKGVPSLENGANLTASLLKVPATKQKSSIFPLYSSIAELFERRWALKRMVAIMVLGLGIGMVYFGMPLAVGNLGFDIYLAVVFNALMEIPSCVATYFLENYRRKPSILAFSVASGICCILCVVVGSELQVAKVGLSLVAFFSAVTAYNVFLIYIIELFPTSVRNTTTSLVRQAIVFVNIFSPFLISAGRKNDIFSYGVFGVVIMSSCLTLVCLPETIGIALCDTMDQQEKKDNLSV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02730 512 CDD MFS_OCT_plant 85 490 - -
Pumo10g02730 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 47 493 IPR020846 GO:0022857
Pumo10g02730 512 Gene3D MFS general substrate transporter like domains 44 507 IPR036259 -
Pumo10g02730 512 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 502 - -
Pumo10g02730 512 Pfam Sugar (and other) transporter 99 497 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo10g02730 512 SUPERFAMILY MFS general substrate transporter 104 495 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02730 Pumo-Chr10 51029127 51031401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02730 7 507 Organic Solute Cotransporters AT1G16390 47.647 2.07e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02730 - - gmx:100819053 861.292