Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02728 ATGGAGGACTCGGTAAAAGAAGTAAGTGAATCTAATTCTGTTCAGCAACAAAATATGAATATGTCATGGGATGAAATGATAGAGAAGGGTTTGGGAAATTTTGGGTGGACGCAGTTCCTGCAATGCATCCTAGTGTCAGTGGCAATGTACTTCGATTCACAGCAATTATTCATAGCCATCTACACGGAAGATTACCCAACATGGCACTGCAGCAACCACACCACATGCACCTCAGGTTCTGACATCTGCAAGCTCCCAAAGTCTTCTTGGGCATGGGATGGACCTTCTTCTAAGACAATCATATCCCAATTTAGCCTTGAATGCGCCAGCAGCTTCATCACAGGTTTACCCCAATCCTCTTTCTTCGTTGGTTGCCTTGTTGGTTCCTTTCTCTTAGCCTCATTGGCTGATTCATCTTTCGGAAGAAAGAACATGATCATTCTGTCTTGTTTGTCAATGTCCATAATTTCACTCATCATCATCTTCTCCACCAACGTTTGGATCTACTCCGCGTTGAGATTCCTCATTGGGTTCTGTCGTTCGTCCATCTCAACATGTTGCTTGGTGTTACTCACGGAGAAAGTGAGCACAAAGTGGAGGTTCACAGTGGGGATTATAGAGTTTTTCTTCTTCACATCGGGGTACATGTCCTTGCCTGGTGTAGCTTATGCCAACAGACATTCATCATGGAAATATCTTTACCTGTGGATTTCGATTCCTGCTATTTGTTATTCTCTCATCGCTTACATTTTTGTTACCGAGTCTCCAAGGTGGCTTCTCATGCAAGGTAGAGTGCAAGAAGCAATGGCAATGCTTAAAGGAATTCCAGAAAATGGTGCAAGCCTAAGCCTAGCAAAAGCACCTTCTAAACAAAGGGCTTCACTTTCCCAACTCTATGCATCAATAGCGGAGTTGTTCAAAACAAGTTGGGCTCCTAAACGAATGGTGGCAGTTATGGGACTTGGTCTTGGAATTGGAATGGTGTATTTTGGCATGCCATTAGCAGTGGGAAACTTGGACTATAACATTTACCTTTCCGTTGTGTTGAATGCATTGATGGAAATACCCTCTTGTGTAGTGACCTATTTCTTGGGAAACTATGCGAGAAAGTTATCCATTTTTGTATTCTCATTAGGAAGTGGGATATGTTGTATATTGTGTGTTGTCATACGTAATGGGCCACGAGGTGTTAAGGTATGGCTAGCAGTGGCATCGTTTTTCTGTGCTTGCACATCTTTCAACGTGTTTCTTATGTACATTATAGAAATATTTCCCACGTGCGTGAGGAACACTACTGCATCACTTGCCGAGACAAGCTGTTGTGTTTGGTTGCATATTCAGCCCCTTTTTGATATCTGCGGGGAGGAAGAATGCCCTTTTCTCTTATGGCGTGTTTGGAGTGGTTATAATTTGCTCCACTTTTACGTTGCTCAGTTTGCCGGAGACCAGAGGAATGACTCTTTCTGA 1467 0.4308 MEDSVKEVSESNSVQQQNMNMSWDEMIEKGLGNFGWTQFLQCILVSVAMYFDSQQLFIAIYTEDYPTWHCSNHTTCTSGSDICKLPKSSWAWDGPSSKTIISQFSLECASSFITGLPQSSFFVGCLVGSFLLASLADSSFGRKNMIILSCLSMSIISLIIIFSTNVWIYSALRFLIGFCRSSISTCCLVLLTEKVSTKWRFTVGIIEFFFFTSGYMSLPGVAYANRHSSWKYLYLWISIPAICYSLIAYIFVTESPRWLLMQGRVQEAMAMLKGIPENGASLSLAKAPSKQRASLSQLYASIAELFKTSWAPKRMVAVMGLGLGIGMVYFGMPLAVGNLDYNIYLSVVLNALMEIPSCVVTYFLGNYARKLSIFVFSLGSGICCILCVVIRNGPRGVKVWLAVASFFCACTSFNVFLMYIIEIFPTCVRNTTASLAETSCCVWLHIQPLFDICGEEECPFLLWRVWSGYNLLHFYVAQFAGDQRNDSF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02728 488 Gene3D MFS general substrate transporter like domains 36 479 IPR036259 -
Pumo10g02728 488 SUPERFAMILY MFS general substrate transporter 103 444 IPR036259 -
Pumo10g02728 488 Pfam Sugar (and other) transporter 108 450 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo10g02728 488 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02728 Pumo-Chr10 51022077 51023543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02728 2 458 Organic Solute Cotransporters AT1G79360 42.977 3.82e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02728 - - vun:114169041 692.96