Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02720 ATGTTACCTGCGGTTATAACAGCTACTGCATTACCATCAATGGGAAGCCTGAGTGTGAGTGCCCAGATCATTATTCTCATTTTGAACATGACAATTCTCACAGGTTGTAGACCAGATTTTCCCCTGCCTAGCTGCAACAAAGACGGGTGGGAGCAGAATAAGGATCTTGTAGATTTAAAAGAGTATCAAAATTTGGATTGGCCTCTCTCTGATTATGACATGTTGATTGGAGCTGCAATGGACAAGGATATGTGTAGACAAAAGTGCCTTGAAGATTGCTTTTGTGCTGTGGCCATATATGGTTGGGGAAAATGTTGGAAGAAGAAGTATCCTTGGAGCAATGGAAGGAAGCACCCTAATGTTACTAGAATAGCTCTTGTCAAGGTGCCTAAAACAGATTTGAACAAGGTTGGGACTGGGAGAGAACAGACAACACTTGTGCTGGTCATATCAATACTGCTTGGGAGCTCCGTGTTCTTCAATGTCCTTCTATTTGTTGCCTTGTTTGCAGCTTTTTACCTTTTCTACCACAGGAAACTTTTGAATCCAAACTTGTCAGCAACTACAACGAGGTGCTTTACATACAAGGAGCTTGAAGAAGCAACCACAGGGTTCAAACAAATATTGGGTCGAGGTGCTTTTGGAACTGTCTATAAAGGGGTGTTGACATCAGACACAAGCAGGTATGTTGCTGTGAAAAGGCTAGATAAGGTGGTGCAAGAAGGTGAAGAGGAGTTCAAAACAGAAGTGAGTGTGATTGGACAAACCCACCACAGGAACTTGGTTCGTTTGCTTGGTTATTGTGATGAAGGGGAGCATCGTCTTCTAGTGTATGAGTACATGAGCATTGGTTCCTTGGCTAGCTTTCTCTTTGGGATCTCAAGGCCTCATTGGAATCAAAGAATGCAAATTGCTTTGGGGATTGCAAGAGGTCTCACATACTTGCATGGAGAGTGCAGCACTCAGATCATTCATTGTGACATAAAGCCTCAGAATATACTCCTAGATGAGTTGTTCACGCCTAGGATTGCTGATTTTGGGTTGGCCAAGTTGTTGTTGGCTGACCAAACTAAAGCTGCTAAGACGGGTGTGAGAGGGACAATTGGTTACTTTGCACCTGAATGGTTTAGGAAAGCTTCAATCACAACCAAAGTAGATGTTTACAGCTTTGGAGTGGTGCTGTTAGAGATCATATGTTGCAAATCAAGTGTTGCCTTTGCAGTGGCAAGTGGAGAAGAGGCATTCATAGATTGGGCATATCGTTGTTATAGCCAAGGAAAGGTGGCTAAATTGGTAGAAAATGATGAGGAGGCAAAGAATGACATAGAGAGGGTAGTAAAGCATGTGATGGTAGCAATTTGGTGCGTTCAAGAGGATCTTTCGCTAAGGCCCTCCATGAAGAAGGCTACCCAAATGCTTGAGGACGTGACGACAGTTTCTGTGCCACCTCGCCCTTCCATGTTCAATTCATAA 1473 0.4345 MLPAVITATALPSMGSLSVSAQIIILILNMTILTGCRPDFPLPSCNKDGWEQNKDLVDLKEYQNLDWPLSDYDMLIGAAMDKDMCRQKCLEDCFCAVAIYGWGKCWKKKYPWSNGRKHPNVTRIALVKVPKTDLNKVGTGREQTTLVLVISILLGSSVFFNVLLFVALFAAFYLFYHRKLLNPNLSATTTRCFTYKELEEATTGFKQILGRGAFGTVYKGVLTSDTSRYVAVKRLDKVVQEGEEEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSIGSLASFLFGISRPHWNQRMQIALGIARGLTYLHGECSTQIIHCDIKPQNILLDELFTPRIADFGLAKLLLADQTKAAKTGVRGTIGYFAPEWFRKASITTKVDVYSFGVVLLEIICCKSSVAFAVASGEEAFIDWAYRCYSQGKVAKLVENDEEAKNDIERVVKHVMVAIWCVQEDLSLRPSMKKATQMLEDVTTVSVPPRPSMFNS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02720 490 Gene3D Phosphorylase Kinase; domain 1 177 280 - -
Pumo10g02720 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Pumo10g02720 490 SMART serkin_6 203 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02720 490 ProSitePatterns Protein kinases ATP-binding region signature. 209 233 IPR017441 GO:0005524
Pumo10g02720 490 Gene3D Transferase(Phosphotransferase) domain 1 281 481 - -
Pumo10g02720 490 ProSiteProfiles Protein kinase domain profile. 203 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02720 490 FunFam S-receptor-like serine/threonine-protein kinase 177 280 - -
Pumo10g02720 490 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 281 481 - -
Pumo10g02720 490 SUPERFAMILY Protein kinase-like (PK-like) 183 474 IPR011009 -
Pumo10g02720 490 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 33 484 - -
Pumo10g02720 490 CDD STKc_IRAK 209 474 - -
Pumo10g02720 490 CDD PAN_AP_plant 66 130 - -
Pumo10g02720 490 Pfam Protein kinase domain 206 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02720 Pumo-Chr10 50969179 50970651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02720 193 489 Receptor kinase-like Gene Family AT5G38280 41.424 1.78e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo10g02720 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02720 - - gmx:100796323 798.89