Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02706 ATGGACTACGAACCCTACGACAGTAGCGGAACTGATGATGATCTTCCACCAACCCATCAAAATAGAATTTCCAGGGGAGGAGGAGGACGTCTCGCTGGGAATGGGAGATCTGCTGTTGGTTCAATTCCGTACCCAAGGATGTATGGTGAAATTGATATGGAGACCCAAATTCATCAGCTTGAGCAAGAAGCATACAGTTCAGTTCTAAGAGCCTTTAAAGCTCAAGCCGATGCCATTACTTGGGAGAAAGAAAGTTTGATTACTGAGCTGAGAAAAGAACTGAGATTGTCAAATGAGGAGCACAGAGAACTTCTAGGTCGGGTTAATGCAGATGATGTGATAAGGAGGATAAGGGAATGGAGACAGGCAGGTGGCCATCAGCCCGGTGTACTTAGTACTGGTCAAGGTCTTCATGATTCAGTTCCCAGTCCCACGGTCTCTGCTTCTCGCAAAAAGCAGAAGATTACACCATCTGTACCACCATCACGATCTTTTGGTGGGCCTTCTCCTCCATTTCATCCCCAAACAGTGACTGCACCCCACCAACCATCTTCTTCTGCAGCGAAACGAGGATCTGTTCCTGGATCAAAGGGAAAGAAGCACAAACCTGGTCAAATATTACCTGGAGTATCTTCAATGAAGCAGTATCCTTCCTCGGGGCCAGGTGGAAGGAATCAAGTACCTAATAGAGCTGTCATGGGTGAGCATGCTGAGGGAGCATCATTTGATTCATTGGTTGGTAGGAGAGTGCGGACAAGATGGCCTGACGACAATAACTTCTATGAAGCTGTCATCACGAACTACAATCCAGCTGATGGACGACATAATCTCGTCTATGACATGGGCAGTGCAAATGAAACATGGGAATGGGTTAATCTATCAGAGATATCTCCCGAAGATATTCAGTGGGTAGGTGAGGATCCTGGAATCAATCACCGTGGAGGTTTTGGGGGTTCTGGACATGGAATGAATAGGTCTGTTGGACGAGATGGTGCTCCCGGAGCTGGAAGAGGTAGAGGAGCTACAAAGGGGCAATCCAGAAAAGATTTTTTGTCATCACAGAATGGCATAGGGAAGAAGGCGCCTGATGATATACAAATACTTCACACAGACACACTAATCAAGGAGGTGGAGAGGGTATTCAGTGCAAATCACCCTGATCCCCTTGAAATTGAGAAAGCAAAGAAAGTATTGAAGGACCATGAGCAGGCTCTTATTGATGCAATTGCAAGACTTAATGATCTTTCTGATGGTGAAAGTGGAGTGCTCAAAATTTATTGCTGGATTTGTAAACGCACTTCATTTCACCTTCAATCATTCTACATCAGTGTGGTGATTTTCATTTCAAACTTCTTTGCTTCCCATGTGCCATCTCAAACAAGCATGGCTCAGCGGTAA 1398 0.4549 MDYEPYDSSGTDDDLPPTHQNRISRGGGGRLAGNGRSAVGSIPYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREWRQAGGHQPGVLSTGQGLHDSVPSPTVSASRKKQKITPSVPPSRSFGGPSPPFHPQTVTAPHQPSSSAAKRGSVPGSKGKKHKPGQILPGVSSMKQYPSSGPGGRNQVPNRAVMGEHAEGASFDSLVGRRVRTRWPDDNNFYEAVITNYNPADGRHNLVYDMGSANETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGMNRSVGRDGAPGAGRGRGATKGQSRKDFLSSQNGIGKKAPDDIQILHTDTLIKEVERVFSANHPDPLEIEKAKKVLKDHEQALIDAIARLNDLSDGESGVLKIYCWICKRTSFHLQSFYISVVIFISNFFASHVPSQTSMAQR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02706 465 MobiDBLite consensus disorder prediction 1 37 - -
Pumo10g02706 465 Coils Coil 391 411 - -
Pumo10g02706 465 MobiDBLite consensus disorder prediction 125 229 - -
Pumo10g02706 465 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 53 140 IPR005491 -
Pumo10g02706 465 MobiDBLite consensus disorder prediction 316 357 - -
Pumo10g02706 465 CDD Tudor_Agenet_AtEML-like 246 296 - -
Pumo10g02706 465 Coils Coil 87 107 - -
Pumo10g02706 465 SUPERFAMILY ENT-like 48 155 IPR036142 -
Pumo10g02706 465 SMART ENT_2 53 126 IPR005491 -
Pumo10g02706 465 Gene3D ENT domain 48 157 IPR036142 -
Pumo10g02706 465 PANTHER PROTEIN EMSY-LIKE 4 11 420 IPR033485 GO:0050832
Pumo10g02706 465 Pfam ENT domain 55 123 IPR005491 -
Pumo10g02706 465 FunFam Protein EMSY-LIKE 3 isoform A 48 179 - -
Pumo10g02706 465 MobiDBLite consensus disorder prediction 133 162 - -
Pumo10g02706 465 Gene3D - 239 290 - -
Pumo10g02706 465 MobiDBLite consensus disorder prediction 163 177 - -
Pumo10g02706 465 MobiDBLite consensus disorder prediction 211 225 - -
Pumo10g02706 465 SUPERFAMILY Tudor/PWWP/MBT 244 284 - -
Pumo10g02706 465 FunFam Protein EMSY-LIKE 3 244 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02706 Pumo-Chr10 50822871 50830023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02706 - - gmx:100790519 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02706 10 50822871 50830023 Pumo10g02706 10 50822871 50830023 ECH