Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02700 ATGAGAGCTGAAAGCTTTTCCCTCATAGTGTTTTTCATTCTGCTGGTTGAGTTGGTGGATTCTCTTAACCGTAGCAATTTTCCAGTGGATTTCTTATTTGGAACTGCCTCTTCTTCTTACCAGGAAGATGTGGGTATAATGAGAGACATAGGATTTGATGCATACAGACTCTCTATCTCATGGTCTAGGGTTCTACGTGGTGGAAACATGAGGGGAGGCATAAACAGAGAGGGCATCACATATTACAACAATCTTATCAATGAACTCCTCTCAAATGGGACAAATTGGGATAACATTGAACTCTCCATGGATAATGCCACTTTCCCAGTCAAAGGAAGACATAAATGCAGCATCCAGGGCCCTTGCTTTCCACTCCACATCAGTCCAATGATTATGAATGCTTTTATTTACTTGAGATCTTTATTTGTTTCATTAGCAACGAGACATGGAGTACAGATTGGTCCAAAGTTTTCTTCAATGAACATAGGGGTTGATGAACTTAATGACAATGCAAAATCACTTGAGGACAACATGAGAATAGACTATATCAGTATCCATCATTCCTGTGTTCACAGTGCAATAAAGTGA 588 0.3963 MRAESFSLIVFFILLVELVDSLNRSNFPVDFLFGTASSSYQEDVGIMRDIGFDAYRLSISWSRVLRGGNMRGGINREGITYYNNLINELLSNGTNWDNIELSMDNATFPVKGRHKCSIQGPCFPLHISPMIMNAFIYLRSLFVSLATRHGVQIGPKFSSMNIGVDELNDNAKSLEDNMRIDYISIHHSCVHSAIK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02700 195 Pfam Glycosyl hydrolase family 1 40 93 IPR001360 GO:0004553|GO:0005975
Pumo10g02700 195 PANTHER GLYCOSYL HYDROLASE 39 94 IPR001360 GO:0004553|GO:0005975
Pumo10g02700 195 SUPERFAMILY (Trans)glycosidases 19 93 IPR017853 -
Pumo10g02700 195 Gene3D Glycosidases 13 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02700 Pumo-Chr10 50762221 50765825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02700 1 93 Glycoside Hydrolase AT5G44640 41.379 3.85e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02700 - K01188 aip:107635256 104.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02700 10 50762221 50765825 Pumo10g02700 10 50762221 50765825 ECH