Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02693 ATGGCAAATAATCATAATGATACAACATCCTCAGATTTTACGTATGATGTTCTTCTGAGTTTTACAGAAGGGAAAGGGTACCCAGTATTTATCGATTATCTCTACCAAGCTTTGCTCGATGATGGAATCAACACCGTCAAATATGATGAGATCGCACACTCTCTTCTTGATGAGACAATAGAGAAGTCCAGAATGTCAATAATTGTTCTGTGTGAAAACTATGCACGTTCCACTTTGTGCCTTGATTTACTAGTCAAGATCATCGAGTGTTATGATGCCAAAGGGAACCGGGTTTTGCCAATTTTCTACAAAGTGGAACCGTCAGATGAATGGGGTGTGAAAAATTATGCAACAGCCATGACTGGACGAGACTCGGACAAGGTCGAAGCATGGAAAGCAGCTTTGTCTAGAATACGCGACCTAGGCGGAGAACATTGCATGGACTATAAGTATGAATCTGGCCTTATCAAGAAGATTGTTAAAGAAACCTATGCTAAATTACCTCCTTCTCCTGTGTTTATAGAAATTAAGCACCCAGTTGGACTGGATTCTCGCTGTGAACAAGTGAAAACAATTTTAAATGTTGAATCTAATGATACCGTTTGCATGTTGGGAATTTATGGAGATAGTGGATTGGGCAAAACCACGCTTGCTGCATATGTGTATAACCAGATCAGGCATCAGTTTGAAGCTGGAAGTTTTCTTGCTGATGTGAGTAAAAAATCACGCAGTAGCTTTGACGGCTTGAAAAATCTCCAAAAGACACTTCTATATGAGACTGGTGAGAAGATACAAACCATCGAAGACAGTACATCTCAAGGAAGCTCTGAAAAAAAATGCAGGCTTAGCCATAAAAAGGTTCTTCTGGTTCTAGATGATGTTGATACCATAGAACAGTTGGAATCATTGGCCGGTGGATGTGATTGA 927 0.4002 MANNHNDTTSSDFTYDVLLSFTEGKGYPVFIDYLYQALLDDGINTVKYDEIAHSLLDETIEKSRMSIIVLCENYARSTLCLDLLVKIIECYDAKGNRVLPIFYKVEPSDEWGVKNYATAMTGRDSDKVEAWKAALSRIRDLGGEHCMDYKYESGLIKKIVKETYAKLPPSPVFIEIKHPVGLDSRCEQVKTILNVESNDTVCMLGIYGDSGLGKTTLAAYVYNQIRHQFEAGSFLADVSKKSRSSFDGLKNLQKTLLYETGEKIQTIEDSTSQGSSEKKCRLSHKKVLLVLDDVDTIEQLESLAGGCD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02693 308 PRINTS Disease resistance protein signature 281 295 - -
Pumo10g02693 308 PRINTS Disease resistance protein signature 203 218 - -
Pumo10g02693 308 Pfam NB-ARC domain 185 302 IPR002182 GO:0043531
Pumo10g02693 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 303 IPR027417 -
Pumo10g02693 308 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 303 IPR044974 GO:0006952
Pumo10g02693 308 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 140 IPR035897 -
Pumo10g02693 308 SMART till_3 14 141 IPR000157 GO:0007165
Pumo10g02693 308 Gene3D - 165 307 IPR027417 -
Pumo10g02693 308 Gene3D - 8 164 IPR035897 -
Pumo10g02693 308 ProSiteProfiles TIR domain profile. 13 167 IPR000157 GO:0007165
Pumo10g02693 308 Pfam TIR domain 15 167 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02693 Pumo-Chr10 50555786 50557833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02693 10 305 WRKY Transcription Factor Family AT4G12020 29.097 3.25e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02693 - - tpra:123920934 335.109