Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02692 ATGGGAAGTGAAAAAATCGAAGGAATAATGCTTCATCCCCCTAAACTTGAAGAAGTGGATAATTGGACTAATACTGCCTTTGAGAAGATGAAAAATCTCAGAATTCTTATTGTTCGGAATACAAAATTTTCAACAGGGCCTACTTATCTTCCAAATAATTTACGGCTCCTTGATTGGATAGGATTCCCATCTGAGTCTTTTCCACCTAATTTTTATCCCGAGAATATTGTTGACTTCCAGTTATCTCATAGTCCTCTGGTATCCGTAAAGCCACTTGAAAAGGTATTTCAGGATTTGACTTTTGTCAATCTCTCCCAGTGTCAATTCATAACTGAAATACCTAACATTCATAAAGCTCAAAACTTAAGAGTATTGACAATTGAGAAATGCCATAAATTGGAAGAGTTTCATCCATCCATTGGGCATATGCGTAACCTTGTATATTTAAGTGCATCAGAGTGCACCATGCTCAGGAAATTTGTGCCACAAATGAATTTGCCATCTCTGGAAATGCTTTCGTTTAACTTTTGCAGTAAACTTAAAGAATTCCCAGAAGTAGTGAGAAACATGGATAATCATAAGCCTAAGCCATTAAAGATTCACATGATAAATACTGCTATTAAGAAGTTTCCAGAGTCCATTTATAATCTTACAGGGCTTGAGTATGTGGACATGTCAACTTGCAGAGAACTCAGAGATTTATCAAGTTTTGTGTCATTGCCAGAACTTGCCACATTAAAGATGAATGGATGTTCTCAACTTGCAGAATCATTTAAAATGTTCAGAAAGAGCCATTCCAAAGCAAATAGCTGCCCAAGTTTAAAGGAATTATATTTAAGCAAGGCTAATCTGTCATATGAAGATCTTTCCATAATTCTTGAAATATTTCCTGAATTGGAATACTTGAATGTATCCCATAATGAATTTGAATCCCTCCCAGAATGCATCAAAGGATCATTGCAATTGAAAAATCTTGATGTAAGTTTTTGCAAGTATCTTAGGGAAATTCCAGAACTTCCATTAAGTATTCAAACTGTAGATGCAAGATACTGTCAATCCTTAACTAAGAAGGCGTCAACCATGATGTTGTCTAAGGTTTATAAAGAAATGGAAAGAATACAAGTTGTGATGCCAGAAACTGAAATTCCAAAGGAGTTTCACTGTACTGACAGTGAAGATATTCCGCTTTTCTGGGCTCGCCAGAAGTTCCCTGTTATTGCTTTGGCATTTGTGTTCAAGGAAGTAAAAAAGAATGATGATATACAGATGGATACCTCAGACTTGTTGCCTGGAGTTGCATCAGCTGAGGAATCCTACACTGTTGGCCTGAACTTGTTTATAGATGGCCAAGAAATATGTTGCAAAGATCACCATTATTGCTTTGTTGGGGATCATCATGTGTTAGTATGTGATCTACATGTTTTGTTCAATGATGAAGAGTGGCAGGGTCTAGATGCATATCTTGGAGATGATTGGAAGGCCGTTCAGGTTCAATGTGAATCAACATTGATTCCAAGTCGCTGGGGAGTTTATGTGTACGAGAAGAAAACAAAAACTGATGATATTCGATTTAGCTCTCCTAATTCAACAAGTTTGGTTCCAAAAACAAGTCCACATAAGAAAACAAGACATGAACAAAATTATGATGTAATAGAAAAATTTGGCCAGAACTTGAATTCATTTAAATTAGAACAAACTGCCTCTGCCTCTGCCTCTGTTGCTGACGTGTTATTGAACTGGTGGAGGAATGCCAAGGCTGATATTAGAGGGGAAGTTTCAGCCTCTATTTACAAGGCAAGTTCACTGCAAGGACATGAAGATGTTGTCTGGGATGTGGCACAGATTTTGGAGATGCTGATGGACAATTTGCCGAAACATATTACTGATTCAGAAGTTCAAAGAACAGGCCAATTGGTGGTTGAATTGTTGGTTGCACAGGCACAACGTATGAAGGAATATGGCCATGAGAAGTTGCACATCAATCTAACTATGCCTATTATTCTAGTGGAATGTCAATGTCACGCTTGTACAGATTTTGAAGGAGCTCAAAGCCTTCGCTATTGGGGAACCGTGGAGCTAAAAGAAGGAGACCCACGTGTGTGGAAAATTTGGAAGAGGAATGAAGCCTTGATGCTAAATTACACTGTTCTGTTGAAATGTGAGCATCACTCTATTGAGGAAGCTTCATGCTCTGGCCATGGGGAATCCTTGGAGGAAGAATACAATGATCCTGCATTGCAAGAATTGATGAGGAGTATAGAAAAAGACGCTATGAGGTTGAATAAATCTTATGGGAAGTTGAAGGCGTCTATTATTCCAATGGATGTCCCAGTTTCTGACAAATATCTTATGGAGATGGCAATCATTAGAGGACTAGAAAGATTGGGAAGATTGGGGTCTAATTTCAACAAGACAACATATGGGAAATTGAGGGTGGAGCATGCTGCTCATAGTGCTACTCATATGCAGCATGAGCTGATGGATCATGATGCTCAGAGCTCTAGTCATATGCAGCGTGAGATGAGGATGGTGCAGGATGCTCAGAATCAGGGGCAGCATGAGATGGGGGTGGAGCAGGATGCTCAGAGCTCTACTATCAGAAGAAGAATAAGTTGGGTTGGATCAGATTATTTTTAG 2637 0.3876 MGSEKIEGIMLHPPKLEEVDNWTNTAFEKMKNLRILIVRNTKFSTGPTYLPNNLRLLDWIGFPSESFPPNFYPENIVDFQLSHSPLVSVKPLEKVFQDLTFVNLSQCQFITEIPNIHKAQNLRVLTIEKCHKLEEFHPSIGHMRNLVYLSASECTMLRKFVPQMNLPSLEMLSFNFCSKLKEFPEVVRNMDNHKPKPLKIHMINTAIKKFPESIYNLTGLEYVDMSTCRELRDLSSFVSLPELATLKMNGCSQLAESFKMFRKSHSKANSCPSLKELYLSKANLSYEDLSIILEIFPELEYLNVSHNEFESLPECIKGSLQLKNLDVSFCKYLREIPELPLSIQTVDARYCQSLTKKASTMMLSKVYKEMERIQVVMPETEIPKEFHCTDSEDIPLFWARQKFPVIALAFVFKEVKKNDDIQMDTSDLLPGVASAEESYTVGLNLFIDGQEICCKDHHYCFVGDHHVLVCDLHVLFNDEEWQGLDAYLGDDWKAVQVQCESTLIPSRWGVYVYEKKTKTDDIRFSSPNSTSLVPKTSPHKKTRHEQNYDVIEKFGQNLNSFKLEQTASASASVADVLLNWWRNAKADIRGEVSASIYKASSLQGHEDVVWDVAQILEMLMDNLPKHITDSEVQRTGQLVVELLVAQAQRMKEYGHEKLHINLTMPIILVECQCHACTDFEGAQSLRYWGTVELKEGDPRVWKIWKRNEALMLNYTVLLKCEHHSIEEASCSGHGESLEEEYNDPALQELMRSIEKDAMRLNKSYGKLKASIIPMDVPVSDKYLMEMAIIRGLERLGRLGSNFNKTTYGKLRVEHAAHSATHMQHELMDHDAQSSSHMQREMRMVQDAQNQGQHEMGVEQDAQSSTIRRRISWVGSDYF 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02692 878 Gene3D Ribonuclease Inhibitor 199 374 IPR032675 -
Pumo10g02692 878 Gene3D Ribonuclease Inhibitor 12 198 IPR032675 -
Pumo10g02692 878 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 57 190 - -
Pumo10g02692 878 SUPERFAMILY L domain-like 22 356 - -
Pumo10g02692 878 SMART LRR_bac_2 296 315 - -
Pumo10g02692 878 SMART LRR_bac_2 319 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02692 Pumo-Chr10 50531502 50539124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02692 2 254 WRKY Transcription Factor Family AT4G12020 34.074 2.05e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02692 - - gsj:114379881 1305.43