Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02691 ATGGCAAATCCGAATGACGGTGCAACATTGAGCGATGATTTCTTCTACGATGTTTTTCTGAGTTTTAGAGGTGCGACCCGTGATGGGTTCACAGATAAACTCTACAACGCTTTGCGGCAAAAGGGAATCTACACTTTCAGAGATACCGAGGAGCTTAGGATTGGGGCTGAAATCAGACCCGCGCTTCTGAAGGCAATCGAGAATTCAAGAATGTCAATGGTTGTTCTCTGTGAAGACTACGCGTCTTCCACTTGGTGCCTTGACGAACTTGCCAAGATCGTTGACTGCTATCATGCTAACAAAGGGAAAGTGCAAGTTCTCGTCATTTTTTACAAAGTTCAACCTTCTGATGTGTGGGAACAGAAAAATTCGTATGCAAAAGCCATGCTTGACCATGAAGCCAGACCCGGAAAAGACCCAGAGAAGGTGAAAAAATGGAGGCAAGCTTTGTCTCAAGTGCGCAACCTCACCGCAGAATATTGCCAGGATGACGGGTATGAACGTGGACTTATCGAGAAGATTGTTAAAGACACCTCTGCTAAATTACCTCAAATCCCTTTACCAATTAAACAGGTACTAGTTGGAACTGATTCTCGGTTTAAAAAGGTGAAACCACTCATAGATATCAAGTCTCATGATGATACCGTCCGCATCTTAGAAATTTATGGAGCTGGCGGAATTGGCAAGACTACATTTGCCTTGTATATATATAACAATATCCTACATGAATTTGAAGCTGCAAGTTTTCTTGCTAATGTCAGAGAAAAATCAAACAAAAGCACTGGAGGCCTGAAAGATCTCCAGAAGATACTTCTATCTGAGATGGGCGTGGAAACAGGAATCATGATGGGCAATACTTTTAATGGGGCCAACGAAATCAAATGCAGACTTAGTCATAAAAAGGTTCTTTTGGTTTTGGATGATGTTGATTCGACAGAACAATTGGAGTCCTTAGTTGGAGGAGGTGATTGGTTTGGTTCCGGCAGTAGGATCATTATAACAACAAGGGATACAACATTGCTAGATAAGCATGTCATCAATGATGTTATCATTGAAAAATATAAAATGAAGGAGCTTAATTATGGTGACTCTCTTGAACTCTTCTGTTGGCATGTTTTTAATATGAGCACACCTCCAAAAGACTATAAAGATGTTTCTAATCATGCAGTGCGTTATGCAAAAGGTCTTCCATTAGCTTTAAAAGTAATTGGCTCCAATCTAAAGGGTGGGAGCCTAAAGGATTGGGAAATGGAATTGGACAAATATAAAAAGATTCCAAATGCCAAGATTCAAGGAGTACTTGAAATAAGCTACCATAGCTTAGATGGCTTGGACCAGAAAATTTTTTTGGACATTGCTTGTTTCTTCAAGGGTGAGAGATGGGAATATGTTGAAAGGATACTAAGGGCTTGTGATTTCTTCCCAAGTATTCGAGTATTTACTGCTAAATGTCTCATAACTATTGATGATAATGGCTGCTTGGATATGCATGATCTAATACAAGTCATGGGTAGAGAGATTGTCAGAAAGGAGTCATCATTAAATGTTGGTCACCGTAGCAGACTTTGGTCTCATAAGGAAGTTCTTCGAGTACTTAAAGAAAACTCGGGAAGCAATAGAATTGAAGGAATAATGCTTGATCCCCCCAGTCATGAAGAAGTAGATGATTGGATAGACATTGCCTTTAAGAAGATGGAGAACCTAAGGATTCTGATTATTAGAAATACAATATTTTCAAAAGCACCTAGTTATCTGCCAAATAGTATACGAGTGCTTGAATGGAAAGGGTACCCATCGAAGTCTCTTCCAACAGATTTTTATCCCACCAAAATTGTTGATTTCAAGTTACCTCACAGTTCCCTAATGTTAGAAAAGCCATTTCAGAAATTTGAGGATTTGACATTCATCAACCTGTCCCAATGTCAATCCATAACTCGAATTCCTGATGTGTCTGGAGCTATAAATTTAAAAGTTTTGACACTCGACAAATGCCTTAAAGTGGAAGGATTTGATAAATCCATTGGATTTATGCCTAACCTTGTGTATATAAGTGCTTTGAGGTGCAACATGCTCAAAAGTTTTGTGCCAAGCATGTATTTACCATCTCTGGAGGTCCTTTCATTTAGCTTTTGCACAAGACTTGAACACTTCCCAGATGTAATGCTAAAGATGGACAAGCCGTTAAAGATTCAATTGGTAAATACTGCTATTAAGGAGTTTCCAATGTCCATCGGTAACCTTACAGGGCTTGAGTACTTGGACATTTCAGGTTGCAAAAGACTTAATATATCAAGAAACTTGTTCTTGTTGCCAAAACTTGTGACCTTATTAGTCGATGGATGTTCACATATTGGAAAATCATTTAAAAGGTTCAAAGAAAGCCATTCAATGGCAAATGGTTGCCCAAATCTGAGGACACTGCATCTAAGCGAGACAAATTTATCAGATGAAGAATTGTACGCAATTCTTAAAGGTTTTCCAAAACTGGAAGCCTTGAAGGTTTCGTTTAATGGTTTCGTCTCTCTCCCAGAATGCATCAAAGGATGTCTGCAATTAAAAAGTCTTGATGTGAGTTATTGCAAGCATCTCAGGAGAATTCCAGAACTCCCTCCGAGCATCCAAGATGTAAATGCAAGATTTTGTGGGCGCTTAACTTCAGAGGCATCAAATTTGCTATGGTCTAAGGTTTATGAAGAGAAGGAAAGAATACAATTTGTGATGCCAAAAACAGACATTCCAGATTGGTTTGATTTTATTGGCAGGTCAGGGTCAAGTACTACTCCGGTTATGTGGGCTCGCAATAAGTTCCCTGTTATTGCTCTAGCATTTGTGTTGGGCAAAGCCAAATTCGGCTCCCCTGCAACGGAGTTATCCCACAACGTTGGTGTCCACTTTTACTTAGGCGACAGCAACAACTCTGCAACGGAGTTATCTTACACCGTTGGTGTCCGCTTGTTCATAGGCGGCCAAGAAATAATATGCCGCCGCAAAGAGTACCATTATTGTTGTGTTGGGGAGGAGCACGTGTTATTATGTGATCTAAGGGTTTTGTTCAGTGAGCAAGAGTGGGAGGGTCTTGATCAACATTTTATTGGAGATGAATGGAGGGCCATTCAGGTTCAATATGACGCAGACTTGCCATTGAGTCACTGGGGAGTATTTGTGTACAGGCAGAAAACAAACACTGATGATATCCAATTTACGACATCGTCAGCTAACTCGGTTCAGAAAGAAACTCCACGGCAGACTGAGCAGAGAAGAAGGCATTTCTTAAAAAACTTCAATCCGAGACAAATATTTGGCCAGTCTTTGACTCTTTATGGCGAGTCGTCGTCAGTGCAACGCCTTTCTTCAAAGGTGATTTTGGGGCACATTCTGGCCGACAGTATTAAAGGGAATAAAAATGATGTTTCAGGGAGTGATTATGGGGCAAGTTTAAAGCAAGTTCACGAGGAATCTACCGGGGATGTGGTGCGGATGATGGAGATTTTCAAGGAGAATACACCAAAACACTTACTTGATAGATACCCTGATTACACACAATCTATATATGGACTTATGGAAGAAGGACTGGTGGCACGGGAAGAACTGTCGAGGGGAGAAGGGGAGGACAGGTTAGTCTTTGATGATTTCTTGATTATCCTAGAGGAGGAAGATGGAAGTCGTCGCTATTGGGGAAGATTGAGGATGAAAGCTGGAGAACCAGGGTTCGACGTAATGGTGAGGAAGGCATTTCAACTTCGGTGGATGAAGCTATCATCAATGTCAAACAAAACTGCCCAAAAGGAGTCAATGCCCGCTGTTCTATTGAAAAGCTGGCAGGAGGAGGATGAAGAATGGTACGAGTACGATCCTGTATTGGAAGAATTCATGTGTAGGATAGCCGAAGACGCTAGGAGGTTGAGGTTGAGTAAATCTTGTAAGAAATTGAAGGCGTCTGTTGTTCCGGTTTCGTATGATGATGGATTTGTTTCTGAGAAATATTCGTTGGAAGCATTATTCTTGAGGGGAAGAGAAAACTTGGAAGATAGAAAATGGGCCCCAGCAACAATACAATTGGGATTGGCAGTGACTACATTGTTAATTCACGGAGTTAACCCACCAGGATTGTTTGGAACTAAGTTAAGAAGATGCCCTACGGGATGTTAA 4149 0.4083 MANPNDGATLSDDFFYDVFLSFRGATRDGFTDKLYNALRQKGIYTFRDTEELRIGAEIRPALLKAIENSRMSMVVLCEDYASSTWCLDELAKIVDCYHANKGKVQVLVIFYKVQPSDVWEQKNSYAKAMLDHEARPGKDPEKVKKWRQALSQVRNLTAEYCQDDGYERGLIEKIVKDTSAKLPQIPLPIKQVLVGTDSRFKKVKPLIDIKSHDDTVRILEIYGAGGIGKTTFALYIYNNILHEFEAASFLANVREKSNKSTGGLKDLQKILLSEMGVETGIMMGNTFNGANEIKCRLSHKKVLLVLDDVDSTEQLESLVGGGDWFGSGSRIIITTRDTTLLDKHVINDVIIEKYKMKELNYGDSLELFCWHVFNMSTPPKDYKDVSNHAVRYAKGLPLALKVIGSNLKGGSLKDWEMELDKYKKIPNAKIQGVLEISYHSLDGLDQKIFLDIACFFKGERWEYVERILRACDFFPSIRVFTAKCLITIDDNGCLDMHDLIQVMGREIVRKESSLNVGHRSRLWSHKEVLRVLKENSGSNRIEGIMLDPPSHEEVDDWIDIAFKKMENLRILIIRNTIFSKAPSYLPNSIRVLEWKGYPSKSLPTDFYPTKIVDFKLPHSSLMLEKPFQKFEDLTFINLSQCQSITRIPDVSGAINLKVLTLDKCLKVEGFDKSIGFMPNLVYISALRCNMLKSFVPSMYLPSLEVLSFSFCTRLEHFPDVMLKMDKPLKIQLVNTAIKEFPMSIGNLTGLEYLDISGCKRLNISRNLFLLPKLVTLLVDGCSHIGKSFKRFKESHSMANGCPNLRTLHLSETNLSDEELYAILKGFPKLEALKVSFNGFVSLPECIKGCLQLKSLDVSYCKHLRRIPELPPSIQDVNARFCGRLTSEASNLLWSKVYEEKERIQFVMPKTDIPDWFDFIGRSGSSTTPVMWARNKFPVIALAFVLGKAKFGSPATELSHNVGVHFYLGDSNNSATELSYTVGVRLFIGGQEIICRRKEYHYCCVGEEHVLLCDLRVLFSEQEWEGLDQHFIGDEWRAIQVQYDADLPLSHWGVFVYRQKTNTDDIQFTTSSANSVQKETPRQTEQRRRHFLKNFNPRQIFGQSLTLYGESSSVQRLSSKVILGHILADSIKGNKNDVSGSDYGASLKQVHEESTGDVVRMMEIFKENTPKHLLDRYPDYTQSIYGLMEEGLVAREELSRGEGEDRLVFDDFLIILEEEDGSRRYWGRLRMKAGEPGFDVMVRKAFQLRWMKLSSMSNKTAQKESMPAVLLKSWQEEDEEWYEYDPVLEEFMCRIAEDARRLRLSKSCKKLKASVVPVSYDDGFVSEKYSLEALFLRGRENLEDRKWAPATIQLGLAVTTLLIHGVNPPGLFGTKLRRCPTGC 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02691 1382 PRINTS Disease resistance protein signature 218 233 - -
Pumo10g02691 1382 PRINTS Disease resistance protein signature 393 407 - -
Pumo10g02691 1382 PRINTS Disease resistance protein signature 296 310 - -
Pumo10g02691 1382 PRINTS Disease resistance protein signature 745 761 - -
Pumo10g02691 1382 Gene3D - 358 442 IPR042197 -
Pumo10g02691 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 156 IPR035897 -
Pumo10g02691 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 452 IPR027417 -
Pumo10g02691 1382 Pfam NB-ARC domain 213 417 IPR002182 GO:0043531
Pumo10g02691 1382 Gene3D - 14 177 IPR035897 -
Pumo10g02691 1382 Pfam TIR domain 16 183 IPR000157 GO:0007165
Pumo10g02691 1382 SUPERFAMILY L domain-like 496 886 - -
Pumo10g02691 1382 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 184 - -
Pumo10g02691 1382 Gene3D - 178 349 IPR027417 -
Pumo10g02691 1382 Gene3D Ribonuclease Inhibitor 727 895 IPR032675 -
Pumo10g02691 1382 Gene3D Ribonuclease Inhibitor 550 726 IPR032675 -
Pumo10g02691 1382 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pumo10g02691 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 762 IPR044974 GO:0006952
Pumo10g02691 1382 SMART till_3 15 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02691 Pumo-Chr10 50510857 50518459 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02691 16 816 WRKY Transcription Factor Family AT4G12020 30.182 5.23e-76 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02691 - - gmx:100800797 1999.17