Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02687 ATGACTAAAGTGCATGTGTTATTTGGTTATGGCAAAAGCTGTCAGTTTTTGTTGGTGGATTGGGTTCTTGAAAATTGCCAACTGGGTCAGATTCTTGAAGTGGTTGATCCTAAGCTAGGTTCAGTTTATGATGAGGAGGAAGTGGAGTTGAGACATTATGATTCTCAAAGCAGCACATCAAGCTTAGGTTTCTTGGAAGCCGTGTTTACGGGCCGTTCTTCTCCTGCCATCTCCTCTTCAGATGTGGTGGCCTCTTCGTCTGAACTGGAAGGCTCTTCTAAAGGTTATGATGTGAAAATTTACACACTAAATTCGTTGCCTGGAGATATTGTTAGGAGAATTGGTTGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATTCAGATCACATAAAAAATTTATTGGGAACTCTCGATAACTTTGGATCGGGTAGTAGAATAATCGTAACAACTAGAAATAAGCAAGTGCTCAAGACTAACAAAGCCGATGAGACATACCAGCTTACAAAACTCAGTTTCGATGAATCACTTGAACTTTTCAATTTGATTGTCTTTAACCAAAGTGAAAGTCAAAGCGAGTAA 585 0.3897 MTKVHVLFGYGKSCQFLLVDWVLENCQLGQILEVVDPKLGSVYDEEEVELRHYDSQSSTSSLGFLEAVFTGRSSPAISSSDVVASSSELEGSSKGYDVKIYTLNSLPGDIVRRIGCMKVLIVLDDVNDSDHIKNLLGTLDNFGSGSRIIVTTRNKQVLKTNKADETYQLTKLSFDESLELFNLIVFNQSESQSE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02687 194 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 110 188 IPR044974 GO:0006952
Pumo10g02687 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 190 IPR027417 -
Pumo10g02687 194 Pfam NB-ARC domain 106 193 IPR002182 GO:0043531
Pumo10g02687 194 Gene3D - 85 167 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02687 Pumo-Chr10 50389936 50396740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02687 113 182 WRKY Transcription Factor Family AT4G12020 42.857 2.08e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02687 - - ccaj:109793527 152.14