Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02671 ATGGAAGAAATAGAAAGAGCAGCATGGGAGGAGGAAGAGGCAGAAGCACAAGTGGAAATCTGGAAGTACGCATTTGGGTTTGTGGAATTAGCAGTGATAAAATGTGCCATTGAGCTTGGCATTGCTGATGCCATTGAAAGCCATGGAAGCCCTATGACACTGTCAGAGTTATCATCAACTCTAGGGTGTGTAGATCCTTCTCTTCTTAACCGCATGATGAGGTTCCTAACTCACAGAAAGATATTCAAATGTGTAGACACTGGTGGTTATGATCAAACACCTTTGTCTCGCCGTTTGATGAGAAATGGCAAACACAGCATGGCTGCTTTTATTCTATTGCAGAGTAGACCTTCAGCGGTAGCAGTTTGGCATAGACTAAGTGCTCGTGTCTTGGCTAATGGCAACCCCACATTTGAAAAGTGTCACGGTAAAGACTTGTGGCACCATGCTGCGAAAAATCCTGATTACAATAATCTCTTCAATGAAGCAATGGCATGTGATGCTAGGCAAATAGTGCCTGCCATCATGAAAGGTTGTAGAGAGGCATTTGAAGGTGTTAGAACATTGGTGGATGTGGGTGGTGGAAATGGAACCACCCTGCGGTTCTTGACTGAATCTTGCCCTTGGATTCGAGGAATCAACTTTGATCTTCCTCATGTCATTGCTGTGGCCCCCAAGTTTGATGGGGTGGAACATGTAGCAGGTGACATGTTTCTAAGTGTTCCTACAGCTGACGCTGCTTTTCTCAAGTGGATTTTTCATTGTTGGGGAGATGAACAGTGCATCCAAATCTTGAAGAACTGTAGGGAAGCCATTGCAAAAGAAAATGGAAAGGTTATTATTGTAGATCAAGTGATTGAAGAAGGAAGTAAGCATGACAGATTTAAGGACGTAGGTTTGATGCTGGACATGGTAATGATGGCGAACACTAACTCAGGCAAAGAGCGGACTCTGAAAGAGTGGGAATATGTGATCAAAATGGCAGGATTCAGCTCTTACACTGTGAAATCCATCCATGCTTTGCAGTCTGTGATTATGGCTTTCTATTGA 1050 0.4362 MEEIERAAWEEEEAEAQVEIWKYAFGFVELAVIKCAIELGIADAIESHGSPMTLSELSSTLGCVDPSLLNRMMRFLTHRKIFKCVDTGGYDQTPLSRRLMRNGKHSMAAFILLQSRPSAVAVWHRLSARVLANGNPTFEKCHGKDLWHHAAKNPDYNNLFNEAMACDARQIVPAIMKGCREAFEGVRTLVDVGGGNGTTLRFLTESCPWIRGINFDLPHVIAVAPKFDGVEHVAGDMFLSVPTADAAFLKWIFHCWGDEQCIQILKNCREAIAKENGKVIIVDQVIEEGSKHDRFKDVGLMLDMVMMANTNSGKERTLKEWEYVIKMAGFSSYTVKSIHALQSVIMAFY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02671 349 Gene3D - 4 99 IPR036388 -
Pumo10g02671 349 FunFam O-methyltransferase family protein 5 99 - -
Pumo10g02671 349 Pfam O-methyltransferase domain 123 331 IPR001077 GO:0008171
Pumo10g02671 349 PANTHER O-METHYLTRANSFERASE 30 332 IPR016461 GO:0008168
Pumo10g02671 349 Pfam Dimerisation domain 32 77 IPR012967 GO:0046983
Pumo10g02671 349 Gene3D Vaccinia Virus protein VP39 101 348 IPR029063 -
Pumo10g02671 349 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 349 IPR016461 GO:0008168
Pumo10g02671 349 PIRSF O-mtase 1 349 IPR016461 GO:0008168
Pumo10g02671 349 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Pumo10g02671 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 104 345 IPR029063 -
Pumo10g02671 349 FunFam O-methyltransferase family protein 101 348 - -
Pumo10g02671 349 CDD AdoMet_MTases 188 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02671 Pumo-Chr10 49494598 49497891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02671 3 335 Monolignol Biosynthesis Gene Families AT5G54160 34.783 7.16e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02671 K22588 - gmx:100782951 483.796