Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02660 ATGCAAATTTCAAAACAATTCAAAGTGCCATCGACTCTGTCCCTGCAGAAAACTCTAAATGGATTCACATCAAAATTTCTCCTGGTGTTTACAGGATATAATAAACTTAAGCATTATGTGTGCTTCGTGCAATCCAGAGAACAGGTCCTAATTCCCATGAACAAACCATGCATTTTTCTTCAAGGAGCAGGTAGCAAATCCTCAAGTATCGAATGGGGTGATCATCTTAATGCCACTTTCTATTCAAAAGCAAATAATACTGTTGCAATGGGCATTACTTTCACGAATACACTCAACACGCCTATAATATTGGAGGATAAGGATACTGCAATCACACAAGCCGTCGCAGTTCGGATCCATGCAGATAAATGTGCTTTCTTTGATTGTGCATTTCTAGGGGTGCAAGACACCTTATATGATCAATATGGTCGCCATTACTACCATAATTGCTACATTCAAGGTGGAGTTGATTTCATATTTGGGAATGGTCAATCAATCTTTGAGGCAAGTCAAATACATTTTTCAATGGGAAAAGATGGTCCCAAAATGGATGGGGTCTTTACAGCACAAGAAAGGGAGTCACCAAATGATACTAGTGGATTTGTCTTTAAAAATTGTAACATAACCGGGGAAAGAGGAACGGCTGTGCTAGGGAGATCTTTAAGGGCTTATGCTAGAGTCATCATTGCCAACTCATTCCTATCAAATGTGGTTACACCTACGGGTTGGACTGCTCGTACCTTTGTTGGCCATGAATCAACCATCACATTTGTGGAGGAGGGAAACAGAGGACCAGGGGCAAATAAATCCAAACGTGTGAAATGGATGAAGCACTTAAGTGGACCCGCACTTGATTACTTCCTAAATATCTCTTACATTGATCAAGAAGGGTGGATTGCAAAATTGCCATCGAAGATCTTCATCTGA 927 0.4035 MQISKQFKVPSTLSLQKTLNGFTSKFLLVFTGYNKLKHYVCFVQSREQVLIPMNKPCIFLQGAGSKSSSIEWGDHLNATFYSKANNTVAMGITFTNTLNTPIILEDKDTAITQAVAVRIHADKCAFFDCAFLGVQDTLYDQYGRHYYHNCYIQGGVDFIFGNGQSIFEASQIHFSMGKDGPKMDGVFTAQERESPNDTSGFVFKNCNITGERGTAVLGRSLRAYARVIIANSFLSNVVTPTGWTARTFVGHESTITFVEEGNRGPGANKSKRVKWMKHLSGPALDYFLNISYIDQEGWIAKLPSKIFI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02660 308 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 300 - -
Pumo10g02660 308 SUPERFAMILY Pectin lyase-like 46 301 IPR011050 -
Pumo10g02660 308 Gene3D - 34 306 IPR012334 -
Pumo10g02660 308 Pfam Pectinesterase 46 277 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02660 Pumo-Chr10 49345358 49347143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02660 47 299 Carbohydrate Esterase AT1G05310 38.258 8.68e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02660 - - aprc:113866591 413.305