Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02653 ATGGCTCAAAAGGCTGAGAAAAACGACACCGAGTTTAAGGTCCCCGAACCAATCACCCCTTGCACCACCACAACCACCTCCTCGATTTCCGAACCTTCTAGATTCTTCGACGCGACCACCCCTGCCACGTCATCACGCTCCCCCAAGCGATCCCTCCCTCTCGACGAAGAATCTCACAAGGACCAAACGACGTCGGAGCCCAAGCGCGCCGTCAACCGCTGCTCCGGCTGCCGGCGGCGCGTGGGGCTCACCGGATTCCGGTGCCGCTGCGGGGACCTCTTCTGCGCCGAGCACCGCTACTCCGACCGCCACGACTGCTCCTACGACTACAAGGCCGCAGGGAGAGAAGCCATCGCCAGGGAAAACCCCGTCGTGAAGGCCGCGAAGATCGTCAAAGTCTGA 402 0.6194 MAQKAEKNDTEFKVPEPITPCTTTTTSSISEPSRFFDATTPATSSRSPKRSLPLDEESHKDQTTSEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02653 133 FunFam Zinc finger AN1-type containing 6 47 129 - -
Pumo10g02653 133 SUPERFAMILY AN1-like Zinc finger 54 127 IPR035896 -
Pumo10g02653 133 MobiDBLite consensus disorder prediction 17 49 - -
Pumo10g02653 133 Gene3D - 43 129 IPR035896 -
Pumo10g02653 133 PANTHER AN1-TYPE ZINC FINGER PROTEIN 37 132 - -
Pumo10g02653 133 MobiDBLite consensus disorder prediction 50 67 - -
Pumo10g02653 133 MobiDBLite consensus disorder prediction 1 71 - -
Pumo10g02653 133 Pfam AN1-like Zinc finger 74 111 IPR000058 GO:0008270
Pumo10g02653 133 SMART AN1_Zf_4 74 111 IPR000058 GO:0008270
Pumo10g02653 133 ProSiteProfiles Zinc finger AN1-type profile. 68 114 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02653 Pumo-Chr10 49208245 49209089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02653 51 133 C2H2 Transcription Factor Family AT3G52800 54.217 2.35e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02653 - - gmx:100794830 235.728