Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02644 ATGCAGGAGAAGATATTACATGACATTGGAGGTAATGCTATGCTTTCAATGGTGTATGGCAAAACCATAACAAGTAAGAACAAGGGAAAGACAAGCGATGAGGTTGAAATATTCACTTTTGAAACCATTGCTGCTGCTACAAACAATTTCTCAGCTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCTTGTTTATAAGGGAACATTTAGTGATCAGCAAGAAGTAGCAATAAAACGACTTTCTAAAAGTTCAGGACAGGGGGTAACAGAGTTTACAAATGAAGCCAAACTCATGGTCAAACTCCAGCACACTCATCTTGTAAAGCTTTTAGGGTTCTGCATCCAGAGATGTGAAAGAATATTGGTCTACGAGTACATGTCTAACAAGAGCTTAGACTTATACCTATTTGATTCAGCTAGAAAGAATTTGCTAGACTGGGAAAAACGCGTGAACATCATTGGAGGCATTGCTCAAGGACTTGTTTATCTTCACAAGTATTCAAGACTAAAGGTGATACATCGGGACCTGAAACCAAGCAATATATTGCTTGATGACGAGATGAATCCTAAGATATCTGACTTTGGTATGGCTCAAATATTTGGTGTAAGAGCATCGGAAGAAAACACAAGTAGAGTTGTTGGTACATGTGGATACATGGCCCCAGAATATGCAATAAATGGTGTTGTGTCCATCAAAACAGATGTATTCAGCTTTGGTGTAATGCTACTAGAGATACTTAGTGGCAAGAAGAATTACAGTCGCTATCATTCGGATCGCCCACTCAACCTCACAGGATACGCGTGGCAACTCTGGAATGAAGGTAGAGCTCTGGAGCTCACAGACCCAGCATTGAATGAATCAAGTTCGCGGAATGAAGTTTTGAGATGTATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCGACAGATAGACCTACCATGTTAGATATAGTTTCTTTTCTATCAAATGATACAATCCAACTTCCCCAACCGAAGCAACCAGCATTCTTCATCAATGAAGTTGTGGAAGAATCAGAGCTTCCTTACAGCCGGCAAGAACTTCATTCCTTAAATGGCGTAACAATTTCTAGTACGCATGGAAGATAA 1107 0.4011 MQEKILHDIGGNAMLSMVYGKTITSKNKGKTSDEVEIFTFETIAAATNNFSAANKLGEGGFGLVYKGTFSDQQEVAIKRLSKSSGQGVTEFTNEAKLMVKLQHTHLVKLLGFCIQRCERILVYEYMSNKSLDLYLFDSARKNLLDWEKRVNIIGGIAQGLVYLHKYSRLKVIHRDLKPSNILLDDEMNPKISDFGMAQIFGVRASEENTSRVVGTCGYMAPEYAINGVVSIKTDVFSFGVMLLEILSGKKNYSRYHSDRPLNLTGYAWQLWNEGRALELTDPALNESSSRNEVLRCIHIGLLCVQDQATDRPTMLDIVSFLSNDTIQLPQPKQPAFFINEVVEESELPYSRQELHSLNGVTISSTHGR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02644 368 Gene3D Transferase(Phosphotransferase) domain 1 126 333 - -
Pumo10g02644 368 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Pumo10g02644 368 SUPERFAMILY Protein kinase-like (PK-like) 32 344 IPR011009 -
Pumo10g02644 368 Pfam Domain of unknown function (DUF3403) 323 368 IPR021820 GO:0004674
Pumo10g02644 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pumo10g02644 368 Pfam Protein kinase domain 52 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02644 368 FunFam Cysteine-rich receptor-like protein kinase 10 16 125 - -
Pumo10g02644 368 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 126 329 - -
Pumo10g02644 368 CDD STKc_IRAK 56 321 - -
Pumo10g02644 368 Gene3D Phosphorylase Kinase; domain 1 23 125 - -
Pumo10g02644 368 PIRSF ILK 4 333 - -
Pumo10g02644 368 SMART serkin_6 50 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02644 368 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 364 - -
Pumo10g02644 368 ProSiteProfiles Protein kinase domain profile. 50 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02644 Pumo-Chr10 49035094 49036530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02644 40 336 Receptor kinase-like Gene Family AT4G23230 60.269 4.65e-130 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02644 Pkinase 9.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02644 - - gmx:100794508 620.157