Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02640 ATGAGGAGAAGTGGAGAAATGCAAGGTTTTAAGGTGCGGTCGCGATTGCGATTGAGAAATCGCGGACAAATACAGCAGTTGCGGTCACGATTGTGGTTGGATCACGGTCAAGATGACTCCTCAAACTTTGATGTTGCAGCCAAAATCACGGTTGTAGGCCGTTTCTTAAAAACATGGAGAAGTGTGCTTCCCCCTCTGTTGTTCTTCCTCATCCTCCAGCTACTAGACCACTCCCAGGTCGAACACATTGCCAATTACTGGCGTCAAGACACCAACGAGGGAAACCTTACTGAAACATGTGCAACAGGAAAATACTCTGTTGTGAACATAGCCTTCCTTTCCATCTTTGGGATTGACGAAATCCCTCAACTCAACCTGGCAGGTCATTGTGACCCCTCTAATAATGGGTGCACCGGCATTGGGAAAGAGATTAGGAATTGCCAAAAGCAAGGGATCAAGGTGATGATCTCTATTCGAGGAGGAACCCACAATGCCATACTTGTGTCGAATTACTTGTGGGACAATTTCCTGGGTGGCTTCTCCACATCACGCCCACTTGGGGATGCTGTATTAGATGGCGTTGATTTTAACATAGAGCGAGACCATATACGATTCCTGGTGCTACTTGCACGTTACCTCATATTATATTCACAGACAGGTAAAGAACCTGTGCACTTGTCAGCAGCACTTCAGTGTCAATTTCCTGATGCTGAGCTGCTGGGTTCGGCAGGCCTTTTTGACTATGTTTGGGTACAATTCTATAACTATCCTTCATGCCATTATACCCAAAACAATGTCGATATCTTTCTCAAACTATGGAACCAATTGTTAGAAACAGATCCAGGCGGAGGTTTAGCTCATTCCAAATTTACACCATTCTCTGAAGAGTTATTTACAGTGAACAAGTCAGCAAATTGTTTTGTCCAGAGCCACAACATAACACTTAGCCGAGTTATAATAGAAAACTTGGATATTTGTTACAAGAGTAATCACGTGGAGATTGACGATAATTATGAACACATGGTTCAGGACCCATTATATCTGCATTCTCCTGGATATAGTATGTACATTCAAATTTTTCTAATAAATCGGACAGCAAATCCTCGGTGCAGACAGCAAAGCCTTCCCTCCCATGGGAGTCGTGACCGTGGTTCCATGGAACGTGTTGGTATCAAAGTTTATGAAGATGACAGTATACAATATTGCTGTGAGATCATATGTAGGAACAACTGTTCCTGTCACCCGTATCCCCCAATAAGTGACAATCAAATTCCTGGATGCCTTATATGGGACCTAGCAACCTTATTCGTTAGAGATTCTAGGGATACAGCACTGTTATTCTGCGTTTCTGTTCCAGTGCTCCAAGAAGAACGCCCAGTCGACGTTGTTAAACACAAAGTAAACAGGTGGTGGATATGGCTCATTGTTGGCGTGGGAGCAGCCCTTGCAATACCCGTGATCTTTTATTTATGCCCTGCCTTGTGGAGAAAATACAGAGCAAAAGTGGAGAGAAGGAAGATGCAGGAGAAGATATTACATGACATTGGAGGTAATGCTATGCTTTCAATGGTGTATGGCAAAACCATAAAAAGTAACAAGAAGGGAAAGACAGGCGATGAGGTTGAAATATTCACTTTTGAAACCATTGCTGCTGCTACAAACAATTTCTCAGCTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACATTAAGTGATCAGCAAGAAGTAGCAATAAAACGACTTTCTAAAAGTTCAGGACAGGGGGTAACAGAGTTTACGAATGAAGCCAAACTCATGGTCAAACTCCGGCACACTCATCTTGTAAAGCTTTTAGGGTTCTGCATCCAGAGATGTGAAAGAATATTGGTCTACGAGTACATGTCTAACAAGAGCTTAGACTTCTACCTATTTGATTCAACTAGAAAGAATTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTGTTTATCTTCACAAGTATTCAAGACTAAAGGTGATACATCGGGACCTGAAAGCAAGCAATATATTGCTTGATGACGAGATGAATCCCAAGATATCTGACTTTGGCATGGCTCAAATATTTGGTGTAAGAGCATCGGAAGAAAACACAAGTAGAGTTGTTGGTACATGTGGATACATGGCCCCAGAATATGCAATAAATGGTGTTGTGTCCATCAAAACAGATGTATTCAGCTTTGGTGTACTGCTACTAGAGATACTTAGTGGCAAGAAGAATTACAGTCACTATCATTCGGATCGCCCACTCAACCTCACAGGATACGTAACGTGGCAACTCTGGAATGAAGGTAGAGCTCTGGAGCTCACAGACCCAGTATTGAATGAATCATGTTTGCAGAATGAAGTTTTGAGATGTATTCATATCGGCCTCTTGTGTGTACAAGATCAAGCGACAGATAGACCTACCATGTTAGATATAGTTTCTTTTCTATCAAATGATACAATCCAACTTCCCCAACCAAAGCAACCAGCATTCTTCATCAATGAAGTTGTGGAAGAATCAGAGCTTCCTTACAGCCGGCAAGAACTTCATTCCTTAAATGGCGTAACAATTTCTATTAACATAGATCTAGGTGGAGGGGGGGTGCTCTGCGGCCTAGCTTGGGAGTTTGCTCTGTGGCGTAGCGCAAGATGTGCAAGAGTGAACAAAAGGAAGATGGAGAGAGTGAGTTGCAAAGAGGGGAGAAGACAATGA 2748 0.4272 MRRSGEMQGFKVRSRLRLRNRGQIQQLRSRLWLDHGQDDSSNFDVAAKITVVGRFLKTWRSVLPPLLFFLILQLLDHSQVEHIANYWRQDTNEGNLTETCATGKYSVVNIAFLSIFGIDEIPQLNLAGHCDPSNNGCTGIGKEIRNCQKQGIKVMISIRGGTHNAILVSNYLWDNFLGGFSTSRPLGDAVLDGVDFNIERDHIRFLVLLARYLILYSQTGKEPVHLSAALQCQFPDAELLGSAGLFDYVWVQFYNYPSCHYTQNNVDIFLKLWNQLLETDPGGGLAHSKFTPFSEELFTVNKSANCFVQSHNITLSRVIIENLDICYKSNHVEIDDNYEHMVQDPLYLHSPGYSMYIQIFLINRTANPRCRQQSLPSHGSRDRGSMERVGIKVYEDDSIQYCCEIICRNNCSCHPYPPISDNQIPGCLIWDLATLFVRDSRDTALLFCVSVPVLQEERPVDVVKHKVNRWWIWLIVGVGAALAIPVIFYLCPALWRKYRAKVERRKMQEKILHDIGGNAMLSMVYGKTIKSNKKGKTGDEVEIFTFETIAAATNNFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGVTEFTNEAKLMVKLRHTHLVKLLGFCIQRCERILVYEYMSNKSLDFYLFDSTRKNLLDWEKRLNIIGGIAQGLVYLHKYSRLKVIHRDLKASNILLDDEMNPKISDFGMAQIFGVRASEENTSRVVGTCGYMAPEYAINGVVSIKTDVFSFGVLLLEILSGKKNYSHYHSDRPLNLTGYVTWQLWNEGRALELTDPVLNESCLQNEVLRCIHIGLLCVQDQATDRPTMLDIVSFLSNDTIQLPQPKQPAFFINEVVEESELPYSRQELHSLNGVTISINIDLGGGGVLCGLAWEFALWRSARCARVNKRKMERVSCKEGRRQ 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02640 915 SMART serkin_6 556 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02640 915 SUPERFAMILY Protein kinase-like (PK-like) 539 848 IPR011009 -
Pumo10g02640 915 Gene3D Phosphorylase Kinase; domain 1 529 631 - -
Pumo10g02640 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Pumo10g02640 915 CDD STKc_IRAK 562 828 - -
Pumo10g02640 915 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 375 853 - -
Pumo10g02640 915 FunFam Os08g0179000 protein 527 631 - -
Pumo10g02640 915 Pfam Protein tyrosine and serine/threonine kinase 559 827 IPR001245 GO:0004672|GO:0006468
Pumo10g02640 915 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 81 338 IPR001223 GO:0005975
Pumo10g02640 915 ProSiteProfiles Protein kinase domain profile. 556 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02640 915 SUPERFAMILY (Trans)glycosidases 82 275 IPR017853 -
Pumo10g02640 915 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 191 199 IPR001579 GO:0004553|GO:0005975
Pumo10g02640 915 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 632 836 - -
Pumo10g02640 915 Gene3D Glycosidases 82 295 - -
Pumo10g02640 915 Pfam Domain of unknown function (DUF3403) 830 871 IPR021820 GO:0004674
Pumo10g02640 915 Gene3D Transferase(Phosphotransferase) domain 1 632 839 - -
Pumo10g02640 915 Pfam Glycosyl hydrolases family 18 83 262 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02640 Pumo-Chr10 48966061 48972547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02640 527 843 Receptor kinase-like Gene Family AT4G23230 56.698 9.71e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02640 PK_Tyr_Ser-Thr 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02640 - - gmx:100794508 986.097