Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02627 ATGTTTTTTGATAACAATCTTTTTAAGGCTCGGGAAGAAAAATACCAATTAAGAATAAGAGTACTCGAGGCACTTGCCTATGGAACTAGAGATGAGAGTGAGGCTGAGAATATCATAGAGGAAGAAAAGAAGGCAGATGAAAAAGAAATCATTAGGTTGATGAAAGAGCAGGAGGACAAAAACTTGGAAATTTCATCACTGAAGCAAGAACTGGAAACAACCAAAAAAACATATGAAGTACAATGCTCACAGTTGGAAGGAGAAGCCAAGGGTGCTAAAGCAGAACTGGAACAAATGTCTCAAGAATATATGCATCAATTGGAAGAATTAAGAAACAAGGTTAAGGAGCTTGAGGTTTCTTCTGATTCAAAAGATCAGAAGTGGAACATGAAAATGAAACAATTGCAGACTGTTATAACATTTCAATTCAGTTCCCTACAGAAATTGAAATTATCTTGGGAATCCATTAAGCAAAATGTTATGAAAGAGCAAACCGTTTATGCAGAGGATTGTGATCGATTAGGTGTTTATCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGCTGCTCTTGCTGAAAATCAAAAAATGTTTAACGAGATTCAAGAATTAAAAGGTGGAAATATCAAAGTATATTGTCGAATTAGACCATTTCTTTCGGGCAAAAAGGAAAAACAGTCTATTGTTGAACACATTGGTGAAAATGATTTGGTTGTGGTAAATCCATCCAAAGAAGGAAAAGATGCCCATCGATCATTTAAATTTAATAAGGTTTTCGGCCATGCCACAACTCAAGCGGAGGTATACTCTGACATCCAATCCTTTATAAGATCAGTACTGGATGGGTATAATGTGTGTATATTTGCTTATGGCCAAACTGGCGCAGGGAAAACTTATACAATGACTGGTCCAAATGGGGCAAAAAGTGAGACTATTAGTGTCAATTATCGAGCTCTAAATGACCTCTTCAGGATTTCCACAAGTAGAGAAGGCTTCATTGACTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTCCGTGGATGGCACACACTTGGGATATTGACTCAATCTCAACCAAATGGCTTAGCAGTACCCGATGCTAGCTTGTTCCCTGTGAAAACATCTTCAGATGTGATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCGATTCATGTTTGTGGGAAGGACTTGAAGACTGGTTCTACCATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTCTGAAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGCCCTCACGTACCATACAGAAACAGCAAGCTTACTCAACTTTTACAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTGTCCAAATTAATTCAGACATAAGTTCATATTCCGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGATGTCAGAGAATTAATGGAACAGATGTCTTCTTTGAAGAACACTATTTTGGCAAAAGATGAGGAGATTGAGAGGCTTCAATTACTCAAAGGTTCAGTTGGTAGCATTGTTAAGCGAAACCAAATTCCACGAAGTAGAAGTATTAGGCACTTTGAAGCTGAAAAACGGAAACCAATGGATGATCATATACACCAAAATGAATTTCTTCATCAATCTGATGGAAGATCAAGTGATTTCTCTGACAGTGGTGTTGCTCCAGGCACAGAAACTGATGGTTCTGAAAATTCCAGTCTCACTGATGGCACAAAATCATCAGATAAGAGATCTAAAGCACTGTGCAACACTGTTCAAGTGATGAGCAAATTAAGCCGAACCTCATCTATCACGCCCACCCTAGTAAAGGACCCCTTGAAGAAGTCATCAGGTATGAAAAAAAGTGTCAGTATAGGCAACCTTAAACCTCCAAAATTGTGGAAGTAA 2103 0.3856 MFFDNNLFKAREEKYQLRIRVLEALAYGTRDESEAENIIEEEKKADEKEIIRLMKEQEDKNLEISSLKQELETTKKTYEVQCSQLEGEAKGAKAELEQMSQEYMHQLEELRNKVKELEVSSDSKDQKWNMKMKQLQTVITFQFSSLQKLKLSWESIKQNVMKEQTVYAEDCDRLGVYLKPLLHAAENYHAALAENQKMFNEIQELKGGNIKVYCRIRPFLSGKKEKQSIVEHIGENDLVVVNPSKEGKDAHRSFKFNKVFGHATTQAEVYSDIQSFIRSVLDGYNVCIFAYGQTGAGKTYTMTGPNGAKSETISVNYRALNDLFRISTSREGFIDYEIGVQMVEIYNEQVRGWHTLGILTQSQPNGLAVPDASLFPVKTSSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVCGKDLKTGSTMVGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDISSYSETLSTLKFAERVSGVELGAARSSKESKDVRELMEQMSSLKNTILAKDEEIERLQLLKGSVGSIVKRNQIPRSRSIRHFEAEKRKPMDDHIHQNEFLHQSDGRSSDFSDSGVAPGTETDGSENSSLTDGTKSSDKRSKALCNTVQVMSKLSRTSSITPTLVKDPLKKSSGMKKSVSIGNLKPPKLWK 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02627 700 Coils Coil 543 570 - -
Pumo10g02627 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 567 IPR027417 -
Pumo10g02627 700 Coils Coil 50 127 - -
Pumo10g02627 700 PANTHER KINESIN-LIKE PROTEIN KLP-3 101 641 IPR027640 GO:0003777|GO:0007018
Pumo10g02627 700 MobiDBLite consensus disorder prediction 609 700 - -
Pumo10g02627 700 Pfam Kinesin motor domain 215 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02627 700 FunFam Uncharacterized protein 45 86 - -
Pumo10g02627 700 Gene3D Kinesin motor domain 205 570 IPR036961 -
Pumo10g02627 700 ProSiteProfiles Kinesin motor domain profile. 209 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02627 700 MobiDBLite consensus disorder prediction 613 641 - -
Pumo10g02627 700 Gene3D - 45 86 - -
Pumo10g02627 700 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 150 531 - -
Pumo10g02627 700 MobiDBLite consensus disorder prediction 649 675 - -
Pumo10g02627 700 PRINTS Kinesin heavy chain signature 479 500 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02627 700 PRINTS Kinesin heavy chain signature 430 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02627 700 PRINTS Kinesin heavy chain signature 399 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02627 700 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02627 700 SMART kinesin_4 207 537 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02627 Pumo-Chr10 48690549 48695537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02627 196 529 Calmodulin-binding Proteins AT5G65930 39.244 6.91e-65 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02627 K10406 - gmx:100819914 1088.94